RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 CDC6Q99741 560 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 MRIQ9BWK5 157 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 CATSPERZQ9NTU4 200 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 CBLCQ9ULV8 474 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 ATP23Q9Y6H3 246 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 STK10O94804 968 aaKnown RBP4.44□□□□□ -1.7
SNX4-202ENST00000465505 C4BPAP04003 597 aaKnown RBP4.44□□□□□ -1.7
SNX4-202ENST00000465505 PYGMP11217 842 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 JAM2P57087 298 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 RAC3P60763 192 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 NOLC1Q14978 699 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNX4-202ENST00000465505 PRKD1Q15139 912 aaPredicted RBP4.44□□□□□ -1.7
SNX4-202ENST00000465505 HS1BP3Q53T59 392 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 Q6ZSN1 163 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 MTDHQ86UE4 582 aaKnown RBP4.44□□□□□ -1.7
SNX4-202ENST00000465505 PTRH1Q86Y79 214 aaKnown RBP4.44□□□□□ -1.7
SNX4-202ENST00000465505 CKAP2LQ8IYA6 745 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 FUKQ8N0W3 1084 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 EDAQ92838 391 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 ADOQ96SZ5 270 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 ZDHHC5Q9C0B5 715 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 GALNT8Q9NY28 637 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 BTBD7Q9P203 1132 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 ARHGAP28Q9P2N2 729 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 HS3ST3A1Q9Y663 406 aa4.44□□□□□ -1.7
SNX4-202ENST00000465505 E9PSI1 815 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 MATN2O00339 956 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 DIAPH1O60610 1272 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 CLASP2O75122 1294 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 SRGAP2CP0DJJ0 459 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 CR2P20023 1033 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 COMTP21964 271 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 PTGS1P23219 599 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 MCCP23508 829 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 CANXP27824 592 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 GJA4P35212 333 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 ETV4P43268 484 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 SUMO1P63165 101 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 GABREP78334 506 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 IL13RA1P78552 427 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 LACTBP83111 547 aaPredicted RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 SSRP1Q08945 709 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 FOXE3Q13461 319 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 STILQ15468 1287 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 WDR72Q3MJ13 1102 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 MTERF2Q49AM1 385 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 FIGNQ5HY92 759 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 USP51Q70EK9 711 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 CXXC5Q7LFL8 322 aaKnown RBP4.43□□□□□ -1.7
SNX4-202ENST00000465505 WNK4Q96J92 1243 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 SCYL1Q96KG9 808 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 PCED1AQ9H1Q7 454 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 INCENPQ9NQS7 918 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 PCDHA9Q9Y5H5 950 aa4.43□□□□□ -1.7
SNX4-202ENST00000465505 CADPSQ9ULU8 1353 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 U2SURPO15042 1029 aaKnown RBP4.42□□□□□ -1.7
SNX4-202ENST00000465505 GSTA4O15217 222 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 RAD17O75943 681 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 CRTAMO95727 393 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 FAM153BP0C7A2 387 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 NAT1P18440 290 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 KRT15P19012 456 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 AOAHP28039 575 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 RBM25P49756 843 aaKnown RBP4.42□□□□□ -1.7
SNX4-202ENST00000465505 RRADP55042 308 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 HERVK_113P62684 666 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 ST5P78524 1137 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 DUSP8Q13202 625 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 NFYCQ13952 458 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 EIF4HQ15056 248 aaKnown RBP4.42□□□□□ -1.7
SNX4-202ENST00000465505 SEC23AQ15436 765 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 CRY1Q16526 586 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 TBR1Q16650 682 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 ZNF568Q3ZCX4 644 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 ZMAT1Q5H9K5 638 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 MIIPQ5JXC2 388 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 LARP4Q71RC2 724 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNX4-202ENST00000465505 ZNF503Q96F45 646 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 IPO9Q96P70 1041 aaKnown RBP4.42□□□□□ -1.7
SNX4-202ENST00000465505 DHRS4Q9BTZ2 278 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 AMNQ9BXJ7 453 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 SMURF1Q9HCE7 757 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 OAZ3Q9UMX2 235 aa4.42□□□□□ -1.7
SNX4-202ENST00000465505 CCDC66A2RUB6 948 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 NPIPB8E9PQR5 432 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 KCNK3O14649 394 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 MPIG6BO95866 241 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 IRX6P78412 446 aaPredicted RBP4.41□□□□□ -1.7
SNX4-202ENST00000465505 KLF10Q13118 480 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 LONRF2Q1L5Z9 754 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 TRIM68Q6AZZ1 485 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 RNF207Q6ZRF8 634 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 EP400NLQ6ZTU2 488 aa4.41□□□□□ -1.7
SNX4-202ENST00000465505 CFHR4Q92496 578 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms