RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 DYDC2Q96IM9 177 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PCDHA12Q9UN75 941 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 NRCAMQ92823 1304 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 OATP04181 439 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SLC26A2P50443 739 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CYP4A11Q02928 519 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 FPGSQ05932 587 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PTGDRQ13258 359 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CTTNQ14247 550 aaKnown RBP18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 EPHA7Q15375 998 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 C9orf50Q5SZB4 431 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 C16orf59Q7L2K0 433 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SH2D3AQ9BRG2 576 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TUBE1Q9UJT0 475 aa18.74■□□□□ 0.59
HLA-DPA1-245ENST00000463066 A0A087WWV3 80 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 MBLAC1A4D2B0 266 aaPredicted RBP18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 STX6O43752 255 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 HBP1O60381 514 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CTSHP09668 335 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CKBP12277 381 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 THPOP40225 353 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TECP42680 631 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ORC2Q13416 577 aaPredicted RBP18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 GPNMBQ14956 572 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 IL17AQ16552 155 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RILPL1Q5EBL4 403 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ZNF618Q5T7W0 954 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RETREG2Q8NC44 543 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 OSBPL7Q9BZF2 842 aa18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 FTOQ9C0B1 505 aaKnown RBP eCLIP18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 FAM49AQ9H0Q0 323 aaPredicted RBP18.73■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TRIP12Q14669 1992 aaPredicted RBP18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RRN3P2A6NIE6 340 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 IQCF3P0C7M6 154 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 GNAT1P11488 350 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 KLRC1P26715 233 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 BFSP2Q13515 415 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PKP1Q13835 747 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 MBTPS1Q14703 1052 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PLA2G4FQ68DD2 849 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 DEFB128Q7Z7B8 93 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TMEM199Q8N511 208 aa18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 BBXQ8WY36 941 aaPredicted RBP18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 EIF2AK1Q9BQI3 630 aaKnown RBP18.72■□□□□ 0.59
HLA-DPA1-245ENST00000463066 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ZBTB39O15060 712 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SELPP16109 830 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PSMC5P62195 406 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RBL2Q08999 1139 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SHHQ15465 462 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ZNF484Q5JVG2 852 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 MTHFD1LQ6UB35 978 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 LRRC8DQ7L1W4 858 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 BRAPQ7Z569 592 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ZNF579Q8NAF0 562 aaKnown RBP18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CAGE1Q8TC20 777 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 DNAJB3Q8WWF6 145 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 LXNQ9BS40 222 aa18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SEPT9Q9UHD8 586 aaPredicted RBP18.71■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PP2D1A8MPX8 630 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 PITPNM1O00562 1244 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 SLITRK3O94933 977 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 C22orf31O95567 290 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 BMP8BP34820 402 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TMEM62Q0P6H9 643 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 MTERF2Q49AM1 385 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 XKR3Q5GH77 459 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 ANO5Q75V66 913 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TPH2Q8IWU9 490 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 CCDC155Q8N6L0 562 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 FAM167AQ96KS9 214 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 HSD17B14Q9BPX1 270 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 NRBP2Q9NSY0 501 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 CLIC4Q9Y696 253 aa18.7■□□□□ 0.58
HLA-DPA1-245ENST00000463066 COL1A2P08123 1366 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 NBNO60934 754 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 MED24O75448 989 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 NPEPPSP55786 919 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 PPIGQ13427 754 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TARBP2Q15633 366 aaKnown RBP18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TMEM240Q5SV17 173 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 ZNF365Q70YC5 407 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 IL23AQ9NPF7 189 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 TRIOBPQ9H2D6 2365 aa18.69■□□□□ 0.58
HLA-DPA1-245ENST00000463066 SPATA31C1P0DKV0 1188 aa18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 CDC25AP30304 524 aa18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 CLCN3P51790 818 aa18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 SF3A1Q15459 793 aaKnown RBP18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 LRRC71Q8N4P6 559 aa18.68■□□□□ 0.58
HLA-DPA1-245ENST00000463066 PPP1R16BQ96T49 567 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms