RNA–Protein interactions for RNA: ENST00000462817.5

LIMS1-211, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 4

Gene LIMS1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-211ENST00000462817 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
LIMS1-211ENST00000462817 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
LIMS1-211ENST00000462817 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
LIMS1-211ENST00000462817 MSH4O15457 936 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 CHMP2AO43633 222 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 GTPBP6O43824 516 aaPredicted RBP17.54■□□□□ 0.4
LIMS1-211ENST00000462817 UPP2O95045 317 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 CHRNA1P02708 482 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 MRPS6P82932 125 aaKnown RBP17.54■□□□□ 0.4
LIMS1-211ENST00000462817 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 ZBTB10Q96DT7 871 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 BRMS1Q9HCU9 246 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
LIMS1-211ENST00000462817 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 MARCH6O60337 910 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 KLRC1P26715 233 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 TAP1Q03518 808 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 ME3Q16798 604 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 INF2Q27J81 1249 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 LETM2Q2VYF4 491 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 NME8Q8N427 588 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
LIMS1-211ENST00000462817 LENG9Q96B70 501 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 RIT2Q99578 217 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 DISC1Q9NRI5 854 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 TRPV2Q9Y5S1 764 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 COL1A2P08123 1366 aa17.53■□□□□ 0.4
LIMS1-211ENST00000462817 DTNBO60941 627 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 TDP2O95551 362 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 SFNP31947 248 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 JAK3P52333 1124 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 MGAT3Q09327 533 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 TRIM29Q14134 588 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 ADGRE1Q14246 886 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 CCDC85BQ15834 202 aaPredicted RBP17.52■□□□□ 0.4
LIMS1-211ENST00000462817 Q4G0T1 1027 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 TSHZ1Q6ZSZ6 1077 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 GTF3C6Q969F1 213 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 FAM167AQ96KS9 214 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 NRBP2Q9NSY0 501 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 DDX25Q9UHL0 483 aaKnown RBP17.52■□□□□ 0.4
LIMS1-211ENST00000462817 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 GINS2Q9Y248 185 aa17.52■□□□□ 0.4
LIMS1-211ENST00000462817 MAFBQ9Y5Q3 323 aaPredicted RBP17.52■□□□□ 0.4
LIMS1-211ENST00000462817 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 M0R2N6 131 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 CYP3A7P24462 503 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 LPIN1Q14693 890 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
LIMS1-211ENST00000462817 CDH23Q9H251 3354 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 MTUS1Q9ULD2 1270 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
LIMS1-211ENST00000462817 MYH9P35579 1960 aaKnown RBP17.5■□□□□ 0.39
LIMS1-211ENST00000462817 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 RFXAPO00287 272 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 KRT2P35908 639 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 NPY5RQ15761 445 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 GJA10Q969M2 543 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 TOP1MTQ969P6 601 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 TGS1Q96RS0 853 aaKnown RBP17.5■□□□□ 0.39
LIMS1-211ENST00000462817 CELF4Q9BZC1 486 aaKnown RBP17.5■□□□□ 0.39
LIMS1-211ENST00000462817 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
LIMS1-211ENST00000462817 UNC45AQ9H3U1 944 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 GJB4Q9NTQ9 266 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 SQORQ9Y6N5 450 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 MICAL3Q7RTP6 2002 aa17.5■□□□□ 0.39
LIMS1-211ENST00000462817 DLL1O00548 723 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 MAGEB2O15479 319 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 EDIL3O43854 480 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 CCNT1O60563 726 aaKnown RBP17.49■□□□□ 0.39
LIMS1-211ENST00000462817 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 LARGE1O95461 756 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 ATP4AP20648 1035 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 TMOD1P28289 359 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 CD52P31358 61 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 FOSBP53539 338 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 PAK2Q13177 524 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
LIMS1-211ENST00000462817 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 LIMCH1Q9UPQ0 1083 aa17.49■□□□□ 0.39
LIMS1-211ENST00000462817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms