RNA–Protein interactions for RNA: ENST00000462043.6

NKIRAS2-208, Transcript of NFKB inhibitor interacting Ras like 2, human

TSL 4 BASIC

Gene NKIRAS2, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NKIRAS2-208	ENST00000462043	PCDHA12	Q9UN75	941 aa		27.63	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	PCDHB6	Q9Y5E3	794 aa		27.63	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	COL1A2	P08123	1366 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	IQCF3	P0C7M6	154 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	CKB	P12277	381 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	PPIG	Q13427	754 aa	Known RBP eCLIP	27.62	■■■□□ 2.01	6e-7	■□□□□ 11.1
NKIRAS2-208	ENST00000462043	RILPL1	Q5EBL4	403 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TRAPPC12	Q8WVT3	735 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	VWCE	Q96DN2	955 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TUBE1	Q9UJT0	475 aa		27.62	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	VPS37C	A5D8V6	355 aa	Predicted RBP	27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	ZBTB42	B2RXF5	422 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	OR52Z1	P0C646	297 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TXK	P42681	527 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	IGBP1	P78318	339 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	PRKCE	Q02156	737 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	EPHA7	Q15375	998 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TRAF7	Q6Q0C0	670 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	CKAP2L	Q8IYA6	745 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	RETREG2	Q8NC44	543 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	FAM167A	Q96KS9	214 aa		27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	27.61	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	RANBP2	P49792	3224 aa	Known RBP	27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043		A0A1W2PPC1	479 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	STBD1	O95210	358 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	SELP	P16109	830 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	ZNF484	Q5JVG2	852 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	NCAPH2	Q6IBW4	605 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	RUFY4	Q6ZNE9	571 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	C16orf59	Q7L2K0	433 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	BANK1	Q8NDB2	785 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	ZBTB10	Q96DT7	871 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	IL23A	Q9NPF7	189 aa		27.6	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	OAT	P04181	439 aa		27.59	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	ZNF618	Q5T7W0	954 aa		27.59	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	LRRC8D	Q7L1W4	858 aa		27.59	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	BRAP	Q7Z569	592 aa		27.59	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	RPAIN	Q86UA6	219 aa		27.59	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	CAND2	O75155	1236 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	RFC2	P35250	354 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	PSMC5	P62195	406 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TAF2	Q6P1X5	1199 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	MTHFD1L	Q6UB35	978 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	TDH	Q8IZJ6	230 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	MTMR6	Q9Y217	621 aa		27.58	■■■□□ 2.01
NKIRAS2-208	ENST00000462043	P4HB	P07237	508 aa	Known RBP	27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	THPO	P40225	353 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	QARS	P47897	775 aa	Known RBP	27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	REST	Q13127	1097 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	PTGDR	Q13258	359 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	GPNMB	Q14956	572 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	C9orf50	Q5SZB4	431 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	TRMT1L	Q7Z2T5	733 aa	Known RBP	27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	FERMT3	Q86UX7	667 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	NRBP2	Q9NSY0	501 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	WRAP73	Q9P2S5	460 aa	Predicted RBP	27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	PCDHA2	Q9Y5H9	948 aa		27.57	■■■□□ 2
NKIRAS2-208	ENST00000462043	POTEM	A6NI47	508 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	STX6	O43752	255 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	HSP90AA1	P07900	732 aa	Known RBP	27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	ACR	P10323	421 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	KLRC1	P26715	233 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	SHH	Q15465	462 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	XKR3	Q5GH77	459 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	TMEM240	Q5SV17	173 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	DYDC2	Q96IM9	177 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	EIF2AK1	Q9BQI3	630 aa	Known RBP	27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.56	■■■□□ 2	1e-7	■■□□□ 13.4
NKIRAS2-208	ENST00000462043	NIFK	Q9BYG3	293 aa	Known RBP	27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	RGL1	Q9NZL6	768 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	CEP131	Q9UPN4	1083 aa		27.56	■■■□□ 2
NKIRAS2-208	ENST00000462043	SMIM35	A0A1B0GVV1	85 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	C22orf31	O95567	290 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	MBTPS1	Q14703	1052 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	TARBP2	Q15633	366 aa	Known RBP	27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	FAM26D	Q5JW98	314 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	RPUSD2	Q8IZ73	545 aa	Known RBP	27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	DNAJB3	Q8WWF6	145 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	HSD17B14	Q9BPX1	270 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	LXN	Q9BS40	222 aa		27.55	■■■□□ 2
NKIRAS2-208	ENST00000462043	LAD1	O00515	517 aa		27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	DKC1	O60832	514 aa	Known RBP eCLIP	27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	SLITRK3	O94933	977 aa		27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	PARN	O95453	639 aa	Known RBP	27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	TEC	P42680	631 aa		27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	HABP4	Q5JVS0	413 aa	Known RBP	27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	C4orf19	Q8IY42	314 aa		27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	CEP89	Q96ST8	783 aa		27.54	■■■□□ 2
NKIRAS2-208	ENST00000462043	MICAL3	Q7RTP6	2002 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	PTPRS	Q13332	1948 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	TMEM150B	A6NC51	233 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	RSPH10B2	B2RC85	870 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	NBN	O60934	754 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	CXCL10	P02778	98 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	PFKM	P08237	780 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	RSPH10B	P0C881	870 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	PRPH	P41219	470 aa		27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	FXR2	P51116	673 aa	Known RBP eCLIP	27.53	■■■□□ 2
NKIRAS2-208	ENST00000462043	ATP2C1	P98194	919 aa	Predicted RBP	27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms