RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MUTP22033 750 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 SFNP31947 248 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ADKP55263 362 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 CCZ1BP86790 482 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 CCZ1P86791 482 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 KRT76Q01546 638 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 GHRHRQ02643 423 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 LRRC63Q05C16 580 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 SNAPC2Q13487 334 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 TRIM14Q14142 442 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 COBLL1Q53SF7 1204 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 MAP1SQ66K74 1059 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 RINT1Q6NUQ1 792 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 MAEAQ7L5Y9 396 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 PRRT2Q7Z6L0 340 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 GPRASP2Q96D09 838 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 EEF2KMTQ96G04 330 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 CDHR1Q96JP9 859 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 BAG1Q99933 345 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 DUSP9Q99956 384 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 TUBGCP2Q9BSJ2 902 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 RUSC1Q9BVN2 902 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ASCC2Q9H1I8 757 aaPredicted RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 SEMA6BQ9H3T3 888 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ZSWIM4Q9H7M6 989 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 POLD4Q9HCU8 107 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 A1CFQ9NQ94 594 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 PLSCR2Q9NRY7 297 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 TRMT1Q9NXH9 659 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 CYP39A1Q9NYL5 469 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ADAMTS5Q9UNA0 930 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 AGTPBP1Q9UPW5 1226 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
MSH2-204ENST00000461394 LCTP09848 1927 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 WDR81Q562E7 1941 aa7.52□□□□□ -1.21
MSH2-204ENST00000461394 ARID2Q68CP9 1835 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 LGALS16A8MUM7 142 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 WDR64B1ANS9 1081 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RSPH10B2B2RC85 870 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 PEX10O60683 326 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 USO1O60763 962 aaKnown RBP7.51□□□□□ -1.21
MSH2-204ENST00000461394 DKC1O60832 514 aaKnown RBP eCLIP7.51□□□□□ -1.213e-14■■■■■ 64.4
MSH2-204ENST00000461394 OFD1O75665 1012 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 PRPF6O94906 941 aaKnown RBP7.51□□□□□ -1.21
MSH2-204ENST00000461394 PSAPP07602 524 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RSPH10BP0C881 870 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 COPB2P35606 906 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 QARSP47897 775 aaKnown RBP7.51□□□□□ -1.21
MSH2-204ENST00000461394 DNM2P50570 870 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 HERVK_113P62684 666 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RBL2Q08999 1139 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 ITGB3BPQ13352 177 aaPredicted RBP7.51□□□□□ -1.21
MSH2-204ENST00000461394 STXBP2Q15833 593 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 ARSHQ5FYA8 562 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 CENPPQ6IPU0 288 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 LBX2Q6XYB7 198 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 SEPT14Q6ZU15 432 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RIOX2Q8IUF8 465 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 CNGA4Q8IV77 575 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 GLIS3Q8NEA6 775 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 C16orf45Q96MC5 204 aaPredicted RBP7.51□□□□□ -1.21
MSH2-204ENST00000461394 HSD17B14Q9BPX1 270 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 SPATC1LQ9H0A9 340 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 RRAGCQ9HB90 399 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 BTBD7Q9P203 1132 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 ITIH6Q6UXX5 1313 aa7.51□□□□□ -1.21
MSH2-204ENST00000461394 MYH9P35579 1960 aaKnown RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 K7ENM7 598 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 BACH1O14867 736 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ZBTB39O15060 712 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 CETN3O15182 167 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 MAFGO15525 162 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 HIP1RO75146 1068 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 STAM2O75886 525 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 GNA14O95837 355 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 SLC25A27O95847 323 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 MYBP10242 640 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ERCC3P19447 782 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 CASP14P31944 242 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ALDH5A1P51649 535 aaPredicted RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 PSMC5P62195 406 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 FKBP3Q00688 224 aaKnown RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 CNTN2Q02246 1040 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 TBC1D8BQ0IIM8 1120 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 TBX2Q13207 712 aaPredicted RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 KCTD2Q14681 263 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 PTPN14Q15678 1187 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 MAN2A1Q16706 1144 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 XKR9Q5GH70 373 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 ZNF746Q6NUN9 644 aaPredicted RBP7.5□□□□□ -1.21
MSH2-204ENST00000461394 MIS18BP1Q6P0N0 1132 aa7.5□□□□□ -1.21
MSH2-204ENST00000461394 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms