RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 GH2P01242 217 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
CPNE6-202ENST00000460657 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
CPNE6-202ENST00000460657 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ANKRD65E5RJM6 399 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 F5H6K3 240 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PDXKO00764 312 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 SLC26A4O43511 780 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 DLATP10515 647 aaKnown RBP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 MXI1P50539 228 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 HERVK_113P62684 666 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 KLRC3Q07444 240 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 SF3A3Q12874 501 aaKnown RBP eCLIP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ALCAMQ13740 583 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 NEK9Q8TD19 979 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 CNOT10Q9H9A5 744 aaKnown RBP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PRDM4Q9UKN5 801 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ADCY8P40145 1251 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 GRB10Q13322 594 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 EDRF1Q3B7T1 1238 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 MGARPQ8TDB4 240 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 LMO7Q8WWI1 1683 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 H0YCG3 227 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 SP8Q8IXZ3 490 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 ANKRD42Q8N9B4 389 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 LACRTQ9GZZ8 138 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 INTS9Q9NV88 658 aaKnown RBP13.08□□□□□ -0.32
CPNE6-202ENST00000460657 FAM169AQ9Y6X4 670 aa13.08□□□□□ -0.32
CPNE6-202ENST00000460657 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 TRPC3Q13507 836 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 SRLQ86TD4 932 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 APBA3O96018 575 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 STX2P32856 288 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 C6orf163Q5TEZ5 329 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 PPP1R14CQ8TAE6 165 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 RIN2Q8WYP3 895 aaPredicted RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 JMJD4Q9H9V9 463 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 PLEKP08567 350 aaPredicted RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 VPS41P49754 854 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 LIG4P49917 911 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 SYN2Q92777 582 aaPredicted RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 SEL1LQ9UBV2 794 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 CAMTA1Q9Y6Y1 1673 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 MAN1A1P33908 653 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 CCDC6Q16204 474 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
CPNE6-202ENST00000460657 MS4A14Q96JA4 679 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 IL17RBQ9NRM6 502 aa13.07□□□□□ -0.32
CPNE6-202ENST00000460657 MIF4GDA9UHW6 222 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 MYO1FO00160 1098 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 NDC80O14777 642 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 THAP12O43422 761 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 CTNND1O60716 968 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 NSFP46459 744 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 PRELPP51888 382 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 BPIFB4P59827 614 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 PTK2Q05397 1052 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 CCDC197Q8NCU1 140 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 RBM12Q9NTZ6 932 aaKnown RBP13.06□□□□□ -0.32
CPNE6-202ENST00000460657 SLC37A4O43826 429 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 ATF2P15336 505 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 KRT15P19012 456 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 ANXA13P27216 316 aa13.06□□□□□ -0.32
CPNE6-202ENST00000460657 BBOF1Q8ND07 529 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms