RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MORC2Q9Y6X9 1032 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-209ENST00000460573 HBP1O60381 514 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 CD4P01730 458 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 MARK3P27448 753 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 DDIT3P35638 169 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 QARSP47897 775 aaKnown RBP25.21■■□□□ 1.63
C9orf3-209ENST00000460573 FAAP100Q0VG06 881 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 CKAP2LQ8IYA6 745 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 RNPC3Q96LT9 517 aaKnown RBP25.21■■□□□ 1.63
C9orf3-209ENST00000460573 NRBP2Q9NSY0 501 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 TRPC6Q9Y210 931 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 ZDHHC9Q9Y397 364 aa25.21■■□□□ 1.63
C9orf3-209ENST00000460573 C17orf102A2RUQ5 167 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 RRN3P2A6NIE6 340 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 HOXC8P31273 242 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 IGSF22Q8N9C0 903 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 EIF2AK1Q9BQI3 630 aaKnown RBP25.2■■□□□ 1.62
C9orf3-209ENST00000460573 LRWD1Q9UFC0 647 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 CLIC4Q9Y696 253 aa25.2■■□□□ 1.62
C9orf3-209ENST00000460573 POTEMA6NI47 508 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 B4GALT4O60513 344 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 ATP4AP20648 1035 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 NASPP49321 788 aaPredicted RBP25.19■■□□□ 1.62
C9orf3-209ENST00000460573 PPFIA1Q13136 1202 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 PTPAQ15257 358 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 PTGISQ16647 500 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 C9orf50Q5SZB4 431 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 ZNF697Q5TEC3 545 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 USP28Q96RU2 1077 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 HSD17B14Q9BPX1 270 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 ZSWIM4Q9H7M6 989 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 NOD1Q9Y239 953 aa25.19■■□□□ 1.62
C9orf3-209ENST00000460573 COL1A2P08123 1366 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 OATP04181 439 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 PRKCEQ02156 737 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 SLC39A14Q15043 492 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 UGCGQ16739 394 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 XKR3Q5GH77 459 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 ZNF484Q5JVG2 852 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 HAUS3Q68CZ6 603 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 GDF6Q6KF10 455 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-209ENST00000460573 C4orf19Q8IY42 314 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 BANK1Q8NDB2 785 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 DYDC2Q96IM9 177 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 TRPV6Q9H1D0 765 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 SETD4Q9NVD3 440 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 CFAP45Q9UL16 551 aa25.18■■□□□ 1.62
C9orf3-209ENST00000460573 CIZ1Q9ULV3 898 aaPredicted RBP25.18■■□□□ 1.62
C9orf3-209ENST00000460573 SZT2Q5T011 3432 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 ZNF862O60290 1169 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 SLITRK3O94933 977 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 TIMP1P01033 207 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 INSRRP14616 1297 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 MUTP22033 750 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 ADAM17P78536 824 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 GRIK4Q16099 956 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 TMEM199Q8N511 208 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 AK8Q96MA6 479 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 LXNQ9BS40 222 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 POLR3CQ9BUI4 534 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-209ENST00000460573 PPP1R12CQ9BZL4 782 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 TUFT1Q9NNX1 390 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 TRMT13Q9NUP7 481 aaKnown RBP25.17■■□□□ 1.62
C9orf3-209ENST00000460573 RGL1Q9NZL6 768 aa25.17■■□□□ 1.62
C9orf3-209ENST00000460573 MYH9P35579 1960 aaKnown RBP25.16■■□□□ 1.62
C9orf3-209ENST00000460573 VWA3AA6NCI4 1184 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 LYPLA2O95372 231 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 YEATS4O95619 227 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 ITGB8P26012 769 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 CEBPZQ03701 1054 aaKnown RBP25.16■■□□□ 1.62
C9orf3-209ENST00000460573 PPIGQ13427 754 aaKnown RBP eCLIP25.16■■□□□ 1.623e-11■□□□□ 10.8
C9orf3-209ENST00000460573 IL17AQ16552 155 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 TPH2Q8IWU9 490 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 PPP1R13LQ8WUF5 828 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 LMBR1Q8WVP7 490 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 FAM161BQ96MY7 647 aa25.16■■□□□ 1.62
C9orf3-209ENST00000460573 NIFKQ9BYG3 293 aaKnown RBP25.16■■□□□ 1.62
C9orf3-209ENST00000460573 FTOQ9C0B1 505 aaKnown RBP eCLIP25.16■■□□□ 1.62
C9orf3-209ENST00000460573 RPA1P27694 616 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 LONP1P36776 959 aaKnown RBP25.15■■□□□ 1.62
C9orf3-209ENST00000460573 CYP4A11Q02928 519 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 PTK7Q13308 1070 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 STK38Q15208 465 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 KRT79Q5XKE5 535 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 LINC00301Q8NCQ3 95 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 TFIP11Q9UBB9 837 aaKnown RBP25.15■■□□□ 1.62
C9orf3-209ENST00000460573 SRPRBQ9Y5M8 271 aaKnown RBP25.15■■□□□ 1.62
C9orf3-209ENST00000460573 MYH15Q9Y2K3 1946 aa25.15■■□□□ 1.62
C9orf3-209ENST00000460573 MBLAC1A4D2B0 266 aaPredicted RBP25.14■■□□□ 1.62
C9orf3-209ENST00000460573 CTTNQ14247 550 aaKnown RBP25.14■■□□□ 1.62
C9orf3-209ENST00000460573 MFSD5Q6N075 450 aa25.14■■□□□ 1.62
C9orf3-209ENST00000460573 OTUD6AQ7L8S5 288 aa25.14■■□□□ 1.62
C9orf3-209ENST00000460573 CCDC155Q8N6L0 562 aa25.14■■□□□ 1.62
C9orf3-209ENST00000460573 TBX21Q9UL17 535 aa25.14■■□□□ 1.62
C9orf3-209ENST00000460573 PPME1Q9Y570 386 aa25.14■■□□□ 1.62
C9orf3-209ENST00000460573 WDR81Q562E7 1941 aa25.14■■□□□ 1.61
C9orf3-209ENST00000460573 DDX11L8A8MPP1 907 aa25.13■■□□□ 1.61
C9orf3-209ENST00000460573 SLC26A4O43511 780 aa25.13■■□□□ 1.61
C9orf3-209ENST00000460573 STBD1O95210 358 aa25.13■■□□□ 1.61
C9orf3-209ENST00000460573 RPLP2P05387 115 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms