RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 APOL5Q9BWW9 433 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 IL25Q9H293 177 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ZSWIM5Q9P217 1185 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MBLAC1A4D2B0 266 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SCG2P13521 617 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NUBP1P53384 320 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MRPS6P82932 125 aaKnown RBP12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 C8orf34Q49A92 452 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MARCH8Q5T0T0 291 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PIGSQ96S52 555 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 FAM49AQ9H0Q0 323 aaPredicted RBP12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 S1PR5Q9H228 398 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CDH22Q9UJ99 828 aa12.98□□□□□ -0.33
PRAMEF35P-201ENST00000458709 STAM2O75886 525 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 BRD1O95696 1058 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 STAG3L1P0CL83 205 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ERVFC1P60507 584 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 IGBP1P78318 339 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 KREMEN2Q8NCW0 462 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CACNA1AO00555 2505 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 DMDP11532 3685 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TECP42680 631 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ID4P47928 161 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TMEM62Q0P6H9 643 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 KCNC3Q14003 757 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 ANKRD54Q6NXT1 300 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SYCE2Q6PIF2 218 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CWC27Q6UX04 472 aaKnown RBP12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 MAP4K1Q92918 833 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 CDCA3Q99618 268 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 PADI3Q9ULW8 664 aa12.96□□□□□ -0.33
PRAMEF35P-201ENST00000458709 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 GSTTP1A0A1W2PQM5 241 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 FSCN2O14926 492 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 CYTH3O43739 400 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 ATP9AO75110 1047 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 FGF18O76093 207 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 UBE3AQ05086 875 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PAK2Q13177 524 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SEC23AQ15436 765 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TMEM266Q2M3C6 531 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SPOUT1Q5T280 376 aaKnown RBP12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 LLGL2Q6P1M3 1020 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 THNSL1Q8IYQ7 743 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 ADSSL1Q8N142 457 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 GLG1Q92896 1179 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 KCNB2Q92953 911 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 NKD2Q969F2 451 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 ERAP1Q9NZ08 941 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 LRFN2Q9ULH4 789 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
PRAMEF35P-201ENST00000458709 FAM186AA6NE01 2351 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 RIF1Q5UIP0 2472 aaKnown RBP12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TBKBP1A7MCY6 615 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 C2CD4DB7Z1M9 353 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 MGEA5O60502 916 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 REC8O95072 547 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SRGAP2BP0DMP2 458 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 IER5Q5VY09 327 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TMEM184AQ6ZMB5 413 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TRAPPC12Q8WVT3 735 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PKD2L1Q9P0L9 805 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
PRAMEF35P-201ENST00000458709 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
PRAMEF35P-201ENST00000458709 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
PRAMEF35P-201ENST00000458709 M0QZ92 97 aa12.93□□□□□ -0.34
PRAMEF35P-201ENST00000458709 INSRRP14616 1297 aa12.93□□□□□ -0.34
PRAMEF35P-201ENST00000458709 KCNA2P16389 499 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms