RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PDHA1P08559 390 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 KRT31Q15323 416 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 RAPGEF5Q92565 580 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 HEY1Q9Y5J3 304 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 KIF24Q5T7B8 1368 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 KIAA0556O60303 1618 aa21.14■□□□□ 0.97
SNX27-204ENST00000458013 ABCB11O95342 1321 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 SERPINB2P05120 415 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 BAG6P46379 1132 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 BBS5Q8N3I7 341 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 NACC1Q96RE7 527 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 PARVGQ9HBI0 331 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 POLR3EQ9NVU0 708 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 TMEM260Q9NX78 707 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 PLEKHG3A1L390 1219 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 CREB3O43889 395 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 HSPA4LO95757 839 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 VSTM4Q8IW00 320 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 AGR3Q8TD06 166 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 KRT10P13645 584 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 RGS9BPQ6ZS82 235 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 CASP8Q14790 479 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 TEX2Q8IWB9 1127 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 FMO2Q99518 471 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 STK17AQ9UEE5 414 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 TADA3O75528 432 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 BEND6Q5SZJ8 279 aaPredicted RBP21.13■□□□□ 0.97
SNX27-204ENST00000458013 RNF26Q9BY78 433 aaPredicted RBP21.13■□□□□ 0.97
SNX27-204ENST00000458013 SNX24Q9Y343 169 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 NEDD4P46934 1319 aa21.13■□□□□ 0.97
SNX27-204ENST00000458013 A0A1W2PQ27 194 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 A0A1W2PQ64 194 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 A0A1W2PQD8 194 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 NUGGCQ68CJ6 796 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 SLC12A6Q9UHW9 1150 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNX27-204ENST00000458013 SUGT1Q9Y2Z0 365 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 CAPRIN1Q14444 709 aaKnown RBP21.12■□□□□ 0.97
SNX27-204ENST00000458013 HIBCHQ6NVY1 386 aaPredicted RBP21.12■□□□□ 0.97
SNX27-204ENST00000458013 PDXDC2PQ6P474 469 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 GTSE1Q9NYZ3 720 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 NOP14P78316 857 aaKnown RBP21.12■□□□□ 0.97
SNX27-204ENST00000458013 POTEMA6NI47 508 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 EIF3CLB5ME19 914 aaKnown RBP21.12■□□□□ 0.97
SNX27-204ENST00000458013 FRA10AC1Q70Z53 315 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 TRIM11Q96F44 468 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 EIF3CQ99613 913 aaKnown RBP21.12■□□□□ 0.97
SNX27-204ENST00000458013 ZNF341Q9BYN7 854 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 GOLPH3LQ9H4A5 285 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 THAP9Q9H5L6 903 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 PTPRTO14522 1441 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 LAD1O00515 517 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 MDH1BQ5I0G3 518 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 RNF139Q8WU17 664 aa21.12■□□□□ 0.97
SNX27-204ENST00000458013 ESRRBO95718 433 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 GUCY2CP25092 1073 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 PDCLQ13371 301 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 ZNF507Q8TCN5 953 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 CNKSR1Q969H4 720 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 ADAMTS1Q9UHI8 967 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 CA4P22748 312 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 MXI1P50539 228 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 MYO1EQ12965 1108 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 PBKQ96KB5 322 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 LMCD1Q9NZU5 365 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 AFF4Q9UHB7 1163 aaKnown RBP21.11■□□□□ 0.97
SNX27-204ENST00000458013 PSAPP07602 524 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 SETSIPP0DME0 302 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 KDELC2Q7Z4H8 507 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 ADAM33Q9BZ11 813 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 NGRNQ9NPE2 291 aaKnown RBP21.11■□□□□ 0.97
SNX27-204ENST00000458013 SPAG7O75391 227 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 FOSP01100 380 aaPredicted RBP21.11■□□□□ 0.97
SNX27-204ENST00000458013 FBXO38Q6PIJ6 1188 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 ERICH1Q86X53 443 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 ATXN7L3BQ96GX2 97 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 TRPV6Q9H1D0 765 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 NDST4Q9H3R1 872 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 TMEM206Q9H813 350 aa21.11■□□□□ 0.97
SNX27-204ENST00000458013 CDK8P49336 464 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 APBA1Q02410 837 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 RESTQ13127 1097 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 MCTP2Q6DN12 878 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 ZC3H18Q86VM9 953 aaKnown RBP21.1■□□□□ 0.97
SNX27-204ENST00000458013 CEP70Q8NHQ1 597 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 LBHD1Q9BQE6 289 aaPredicted RBP21.1■□□□□ 0.97
SNX27-204ENST00000458013 ARHGDIAP52565 204 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 RNF135Q8IUD6 432 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 STAT3P40763 770 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 BHMT2Q9H2M3 363 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 MRPL47Q9HD33 250 aaKnown RBP21.1■□□□□ 0.97
SNX27-204ENST00000458013 TXLNGQ9NUQ3 528 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 LRRC14Q15048 493 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 SCOCQ9UIL1 159 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 JRKLQ9Y4A0 524 aa21.1■□□□□ 0.97
SNX27-204ENST00000458013 ATG16L1Q676U5 607 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms