RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 LXNQ9BS40 222 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 SCAND2PQ9GZW5 306 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 ZSWIM4Q9H7M6 989 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 GTF2IRD1Q9UHL9 959 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 MYH11P35749 1972 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 COL1A2P08123 1366 aa13.2□□□□□ -0.3
TRAPPC12-212ENST00000457845 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CD4P01730 458 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 SMIM10L2AP0DMW4 78 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 SMIM10L2BP0DMW5 78 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 HIC1Q14526 733 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 LRRC26Q2I0M4 334 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 XKR3Q5GH77 459 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 AXDND1Q5T1B0 1012 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 NIFKQ9BYG3 293 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 MKI67P46013 3256 aaKnown RBP13.19□□□□□ -0.3
TRAPPC12-212ENST00000457845 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 CUTAO60888 179 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 OATP04181 439 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 INSRRP14616 1297 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 MARK3P27448 753 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 CDC25AP30304 524 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 ATN1P54259 1190 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 PRKCEQ02156 737 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 TARBP2Q15633 366 aaKnown RBP13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 ECM1Q16610 540 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 ANO5Q75V66 913 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 TPH2Q8IWU9 490 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 NRBP2Q9NSY0 501 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
TRAPPC12-212ENST00000457845 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 RTP1P59025 263 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 PPFIA1Q13136 1202 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 MARCH8Q5T0T0 291 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 GDF6Q6KF10 455 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 CLEC17AQ6ZS10 378 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 PPP1R13LQ8WUF5 828 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 SPATA32Q96LK8 384 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 PNMA5Q96PV4 448 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 ANKEF1Q9NU02 776 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 SIP14410 1827 aa13.17□□□□□ -0.3
TRAPPC12-212ENST00000457845 TANC1Q9C0D5 1861 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 KDM3AQ9Y4C1 1321 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 ZBTB39O15060 712 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 B4GALT4O60513 344 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 GNAT1P11488 350 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 UBA7P41226 1012 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 TLE2Q04725 743 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 FAAP100Q0VG06 881 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 GRB10Q13322 594 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 GRIK4Q16099 956 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 TRIM60Q495X7 471 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 CABP7Q86V35 215 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 NACC1Q96RE7 527 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
TRAPPC12-212ENST00000457845 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 DCDC2CA8MYV0 355 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 TREHO43280 583 aa13.15□□□□□ -0.3
TRAPPC12-212ENST00000457845 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms