RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CLK2P49760 499 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ATP1A2P50993 1020 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP2R2AP63151 447 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 IRX3P78415 501 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 GPSM2P81274 684 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 EVX2Q03828 476 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 IKQ13123 557 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PICALMQ13492 652 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 DHX34Q14147 1143 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 NFIL3Q16649 462 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 UBE2SQ16763 222 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 KNOP1Q1ED39 458 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 BMT2Q1RMZ1 405 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SKIDA1Q1XH10 827 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC35G1Q2M3R5 365 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 KRT71Q3SY84 523 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 Q4G0T1 1027 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZCWPW2Q504Y3 356 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEL1L2Q5TEA6 688 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 EMC10Q5UCC4 262 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 GKAP1Q5VSY0 366 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCTD16Q68DU8 428 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEBQ6S5H4 581 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 HS2ST1Q7LGA3 356 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 DAAM2Q86T65 1068 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 RPAINQ86UA6 219 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PACS2Q86VP3 889 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TXNRD3Q86VQ6 643 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SFR1Q86XK3 245 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 RHOT2Q8IXI1 618 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ADGRF4Q8IZF3 695 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CACNA2D3Q8IZS8 1091 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CNPY4Q8N129 248 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 UBL4BQ8N7F7 174 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ANKS4BQ8N8V4 417 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TSEN2Q8NCE0 465 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 MORC4Q8TE76 937 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 LRRC15Q8TF66 581 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF473Q8WTR7 871 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 U2AF1L4Q8WU68 220 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 HDAC7Q8WUI4 952 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CASKIN2Q8WXE0 1202 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 RFFLQ8WZ73 363 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARL8AQ96BM9 186 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 DNAJC19Q96DA6 116 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC114Q96M63 670 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 INPP4AQ96PE3 977 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 MKNK1Q9BUB5 465 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PLVAPQ9BX97 442 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 AMNQ9BXJ7 453 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM129AQ9BZQ8 928 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 COA1Q9GZY4 146 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 EHD4Q9H223 541 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 GANQ9H2C0 597 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CPVLQ9H3G5 476 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PLEKHA4Q9H4M7 779 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 JMJD4Q9H9V9 463 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMBIM4Q9HC24 238 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEPT11Q9NVA2 429 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SMARCAL1Q9NZC9 954 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 EHD2Q9NZN4 543 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TBC1D7Q9P0N9 293 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 GCNT4Q9P109 453 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SAMD15Q9P1V8 674 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEL1LQ9UBV2 794 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SRP68Q9UHB9 627 aaKnown RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 ADAMTS1Q9UHI8 967 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SERPINB13Q9UIV8 391 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 MTUS1Q9ULD2 1270 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TTC7AQ9ULT0 858 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRAF3IP3Q9Y228 551 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 RABGAP1Q9Y3P9 1069 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 DAGLAQ9Y4D2 1042 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SAMM50Q9Y512 469 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PCDHA1Q9Y5I3 950 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 CAPN7Q9Y6W3 813 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYH10P35580 1976 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 NCANO14594 1321 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 PFASO15067 1338 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 SYNGAP1Q96PV0 1343 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 IRS2Q9Y4H2 1338 aa3.63□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYH4Q9Y623 1939 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 A0A087X0T9 212 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 IGKV6D-41A0A0C4DH26 115 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 ESYT3A0FGR9 886 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 GMNCA6NCL1 334 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 WTIPA6NIX2 430 aaPredicted RBP3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF233A6NK53 670 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC169A6NNP5 214 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP17L10C9JJH3 530 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 E9PMD0 336 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPEF1O14829 653 aaPredicted RBP3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCNQ2O43526 872 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 TLR2O60603 784 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 NOL4O94818 638 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 GCNT3O95395 438 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 EYA4O95677 639 aa3.62□□□□□ -1.83
HMGN1P18-201ENST00000457642 KRT14P02533 472 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms