RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
MSC-AS1-201ENST00000457356 FBXO11Q86XK2 927 aa10.56□□□□□ -0.72
MSC-AS1-201ENST00000457356 GOLPH3LQ9H4A5 285 aa10.56□□□□□ -0.72
MSC-AS1-201ENST00000457356 MRPL11Q9Y3B7 192 aaKnown RBP10.56□□□□□ -0.72
MSC-AS1-201ENST00000457356 RASGRF2O14827 1237 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TADA3O75528 432 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TNNI1P19237 187 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 ANKRD13AQ8IZ07 590 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 P2RX5Q93086 422 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 RUNDC3BQ96NL0 473 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 GLIS2Q9BZE0 524 aaPredicted RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 GLT8D2Q9H1C3 349 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 MLXIPQ9HAP2 919 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 VCX3AQ9NNX9 186 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 PANK4Q9NVE7 773 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 IRAK4Q9NWZ3 460 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 NOP53Q9NZM5 478 aaKnown RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 PLAAQ9Y263 795 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 GDAQ9Y2T3 454 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TNPO2O14787 897 aaKnown RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 KLRK1P26718 216 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 SEPT2Q15019 361 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 NXNQ6DKJ4 435 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 FAM47EQ6ZV65 393 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 FASTKD5Q7L8L6 764 aaKnown RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 GLG1Q92896 1179 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 CYTH2Q99418 400 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 LZTS2Q9BRK4 669 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TMEM39BQ9GZU3 492 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 GNA14O95837 355 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 SKIP12755 728 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 KIF11P52732 1056 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TRPC3Q13507 836 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 MUM1L1Q5H9M0 696 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 MIER3Q7Z3K6 550 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 HIPK4Q8NE63 616 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 PI4K2BQ8TCG2 481 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 FMO2Q99518 471 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 NRXN3Q9Y4C0 1643 aa10.55□□□□□ -0.72
MSC-AS1-201ENST00000457356 LRRN2O75325 713 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 ATF2P15336 505 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 HMGCS2P54868 508 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NAIF1Q69YI7 327 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 RAET1EQ8TD07 263 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 DPF2Q92785 391 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 ATP2A3Q93084 1043 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NBPF3Q9H094 633 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NT5C3AQ9H0P0 336 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 PCDHA13Q9Y5I0 950 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 RGL2O15211 777 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 ACSL3O95573 720 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 CYP2D6P10635 497 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 FKBP3Q00688 224 aaKnown RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 RETREG2Q8NC44 543 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 LBHD1Q9BQE6 289 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 XAB2Q9HCS7 855 aaKnown RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 HERC5Q9UII4 1024 aaKnown RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 CCL15-CCL14A0A0B4J2E2 113 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NR2F2P24468 414 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 SLC16A2P36021 539 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 CCL15Q16663 113 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 GPATCH4Q5T3I0 446 aaKnown RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 EEPD1Q7L9B9 569 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 TXNRD3Q86VQ6 643 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 MAIP1Q8WWC4 291 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 CCT6BQ92526 530 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 ZSWIM5Q9P217 1185 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 SNX24Q9Y343 169 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 IFT172Q9UG01 1749 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 LRP6O75581 1613 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 HMGB1P1B2RPK0 211 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 SKAP2O75563 359 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 MSH2P43246 934 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 STAT2P52630 851 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 SNX16P57768 344 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 GUCY1A3Q02108 690 aa10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
MSC-AS1-201ENST00000457356 DBN1Q16643 649 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms