RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ANKRD13CQ8N6S4 541 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC5A5Q92911 643 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 BCAS3Q9H6U6 928 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 TUFT1Q9NNX1 390 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 PLCB1Q9NQ66 1216 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 TYW1Q9NV66 732 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 PSD3Q9NYI0 1048 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 ARMCX3Q9UH62 379 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 ZBTB21Q9ULJ3 1066 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 HYOU1Q9Y4L1 999 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 CLRN2A0PK11 232 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 C2orf54Q08AI8 447 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 DRC1Q96MC2 740 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 NOX5Q96PH1 765 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 GCOM1H8Y6P7 765 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 SLITRK3O94933 977 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 CFBP00751 764 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 POLR2MP0CAP2 368 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 DPEP1P16444 411 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 GAP43P17677 238 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 POLD1P28340 1107 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 PPP2R5CQ13362 524 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 RAPGEF1Q13905 1077 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC18A3Q16572 532 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 KLHDC7AQ5VTJ3 777 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 TLR10Q9BXR5 811 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 OLFML3Q9NRN5 406 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 ASTN1O14525 1302 aa20.19■□□□□ 0.82
SEMA3B-209ENST00000456560 TBCAO75347 108 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 AFPP02771 609 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 NFRKBQ6P4R8 1299 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 VIPAS39Q9H9C1 493 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 PLA2G6O60733 806 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 AKAP3O75969 853 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 NR3C1P04150 777 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 EPS15P42566 896 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 CTTNQ14247 550 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 DLGAP5Q15398 846 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 NAB2Q15742 525 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 ASIC2Q16515 512 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 SPDYE2Q495Y8 402 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 CCDC174Q6PII3 467 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 CCNI2Q6ZMN8 369 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 C1orf186Q6ZWK4 172 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 GOLGA5Q8TBA6 731 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 CHURC1Q8WUH1 139 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 CWC15Q9P013 229 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 VPS18Q9P253 973 aa20.18■□□□□ 0.82
SEMA3B-209ENST00000456560 ACTN1P12814 892 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC9A1P19634 815 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC20A2Q08357 652 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 SLC30A10Q6XR72 485 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 FAM133AQ8N9E0 248 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 DYDC2Q96IM9 177 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 VCPKMTQ9H867 229 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 METTL14Q9HCE5 456 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 FEZ2Q9UHY8 353 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 A0A087X0T9 212 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 NCK2O43639 380 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 BUB1O43683 1085 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 FAM228BP0C875 321 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 RPL13P26373 211 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 PON1P27169 355 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 KLHL30Q0D2K2 578 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 EPHA7Q15375 998 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 MAP9Q49MG5 647 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 GRIPAP1Q4V328 841 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 IRF2BP2Q7Z5L9 587 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 SPATA4Q8NEY3 305 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 PIGOQ8TEQ8 1089 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 POLD4Q9HCU8 107 aa20.17■□□□□ 0.82
SEMA3B-209ENST00000456560 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 RBBP6Q7Z6E9 1792 aaKnown RBP20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 TGFB1I1O43294 461 aa20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 TBC1D12O60347 775 aa20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 GCNT3O95395 438 aa20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 KCNA3P22001 575 aa20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
SEMA3B-209ENST00000456560 EIF3DO15371 548 aaKnown RBP eCLIP20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 RAD17O75943 681 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 XRCC5P13010 732 aaKnown RBP20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 MUTP22033 750 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 CASP4P49662 377 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 PRELPP51888 382 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 KCNA1Q09470 495 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 FKBP1CQ5VVH2 108 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 TPH2Q8IWU9 490 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 BORCS6Q96GS4 357 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 TSKSQ9UJT2 592 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 ZMYND10O75800 440 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 UCHL3P15374 230 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 KLRC1P26715 233 aa20.15■□□□□ 0.82
SEMA3B-209ENST00000456560 EXOC3L4Q17RC7 722 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms