RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 SETD4Q9NVD3 440 aa7.96□□□□□ -1.14
COMMD1-205ENST00000455659 GABBR1Q9UBS5 961 aa7.96□□□□□ -1.14
COMMD1-205ENST00000455659 SEPT9Q9UHD8 586 aaPredicted RBP7.96□□□□□ -1.14
COMMD1-205ENST00000455659 EYSQ5T1H1 3165 aa7.96□□□□□ -1.14
COMMD1-205ENST00000455659 COL1A2P08123 1366 aa7.96□□□□□ -1.14
COMMD1-205ENST00000455659 POTEMA6NI47 508 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 CAND2O75155 1236 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 BAG4O95429 457 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 PFKMP08237 780 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 CKBP12277 381 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 INSRRP14616 1297 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 SELPP16109 830 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 PDCP20941 246 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 RFC2P35250 354 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 THPOP40225 353 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 EPHB4P54760 987 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TRIM71Q2Q1W2 868 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 C9orf50Q5SZB4 431 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 LARP1BQ659C4 914 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 SWSAP1Q6NVH7 229 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 B3GNT9Q6UX72 402 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TRMT1LQ7Z2T5 733 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 DEFB128Q7Z7B8 93 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 RETREG2Q8NC44 543 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 BANK1Q8NDB2 785 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TRAPPC12Q8WVT3 735 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 HAS1Q92839 578 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TNPO1Q92973 898 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 INTS4Q96HW7 963 aaKnown RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 LXNQ9BS40 222 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 FAM49AQ9H0Q0 323 aaPredicted RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TMEM60Q9H2L4 133 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 IL23AQ9NPF7 189 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 CEP131Q9UPN4 1083 aa7.95□□□□□ -1.14
COMMD1-205ENST00000455659 MAFBQ9Y5Q3 323 aaPredicted RBP7.95□□□□□ -1.14
COMMD1-205ENST00000455659 TRANK1O15050 2925 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 MBLAC1A4D2B0 266 aaPredicted RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 EML1O00423 815 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 ZNF862O60290 1169 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 HBP1O60381 514 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 RPLP2P05387 115 aaKnown RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 ACRP10323 421 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 CYP4A11Q02928 519 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 SPIRE1Q08AE8 756 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 ZNF174Q15697 407 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 HABP4Q5JVS0 413 aaKnown RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 ZNF618Q5T7W0 954 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 RSPH3Q86UC2 560 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 NEK9Q8TD19 979 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 ZBTB10Q96DT7 871 aa7.94□□□□□ -1.14
COMMD1-205ENST00000455659 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 MTIF3Q9H2K0 278 aaKnown RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 TTC12Q9H892 705 aaPredicted RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 COL4A4P53420 1690 aaPredicted RBP7.94□□□□□ -1.14
COMMD1-205ENST00000455659 MYH11P35749 1972 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 COL6A3P12111 3177 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 TMEM150BA6NC51 233 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 RRN3P2A6NIE6 340 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 ZBBXA8MT70 800 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 ZBTB42B2RXF5 422 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 M0QZ92 97 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 DKC1O60832 514 aaKnown RBP eCLIP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 PARNO95453 639 aaKnown RBP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 C22orf31O95567 290 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 IQCF3P0C7M6 154 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 ATP4AP20648 1035 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 TXKP42681 527 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 QARSP47897 775 aaKnown RBP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 PSMC5P62195 406 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 ADAM17P78536 824 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 MBTPS1Q14703 1052 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 SHHQ15465 462 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 TMEM266Q2M3C6 531 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 MTERF2Q49AM1 385 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 RILPL1Q5EBL4 403 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 ZNF484Q5JVG2 852 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 HAUS3Q68CZ6 603 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 PLA2G4FQ68DD2 849 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 BRAPQ7Z569 592 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 FERMT3Q86UX7 667 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 RPUSD2Q8IZ73 545 aaKnown RBP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 CCDC43Q96MW1 224 aaKnown RBP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 MTMR9Q96QG7 549 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 MAP7D2Q96T17 732 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 FTOQ9C0B1 505 aaKnown RBP eCLIP7.93□□□□□ -1.14
COMMD1-205ENST00000455659 PCDHB6Q9Y5E3 794 aa7.93□□□□□ -1.14
COMMD1-205ENST00000455659 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 NLRC5Q86WI3 1866 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 RSPH10B2B2RC85 870 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 NBNO60934 754 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 P4HBP07237 508 aaKnown RBP7.92□□□□□ -1.14
COMMD1-205ENST00000455659 RSPH10BP0C881 870 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 GHRP10912 638 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 ACTN1P12814 892 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 SYT1P21579 422 aa7.92□□□□□ -1.14
COMMD1-205ENST00000455659 TOB1P50616 345 aaPredicted RBP7.92□□□□□ -1.14
COMMD1-205ENST00000455659 CLCN3P51790 818 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms