RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 BMP5P22003 454 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 KCNQ1P51787 676 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 GRM7Q14831 915 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 TNNI3KQ59H18 835 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 USP30Q70CQ3 517 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 LARP4Q71RC2 724 aaKnown RBP eCLIP3.76□□□□□ -1.81
LINC02540-201ENST00000455554 GPR135Q8IZ08 494 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 THEMISQ8N1K5 641 aaPredicted RBP3.76□□□□□ -1.81
LINC02540-201ENST00000455554 D2HGDHQ8N465 521 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 NAF1Q96HR8 494 aaKnown RBP3.76□□□□□ -1.81
LINC02540-201ENST00000455554 CD244Q9BZW8 370 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 EPN3Q9H201 632 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 ARHGAP28Q9P2N2 729 aa3.76□□□□□ -1.81
LINC02540-201ENST00000455554 TMEM191CA6NGB0 347 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 PDE6AP16499 860 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 VAMP1P23763 118 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 ADCY8P40145 1251 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 ATXN1P54253 815 aaKnown RBP3.75□□□□□ -1.81
LINC02540-201ENST00000455554 CRHR2Q13324 411 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 FXNQ16595 210 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 SLC10A6Q3KNW5 377 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 LRCH2Q5VUJ6 765 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 EEPD1Q7L9B9 569 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 CXXC5Q7LFL8 322 aaKnown RBP3.75□□□□□ -1.81
LINC02540-201ENST00000455554 DCAF4Q8WV16 495 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 ZFYVE21Q9BQ24 234 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 OR10A2Q9H208 303 aa3.75□□□□□ -1.81
LINC02540-201ENST00000455554 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 A0A1W2PQU0 124 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 FAM47E-STBD1D6RA91 191 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 SOD2P04179 222 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 FBLP22087 321 aaKnown RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 GPR85P60893 370 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 ZC3H6P61129 1189 aaKnown RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 IL13RA1P78552 427 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 RRP1BQ14684 758 aaKnown RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 EIF4HQ15056 248 aaKnown RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 PCOLCEQ15113 449 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 CCDC142Q17RM4 750 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 BTBD8Q5XKL5 378 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 LAIR1Q6GTX8 287 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 KCNT2Q6UVM3 1135 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 RPUSD2Q8IZ73 545 aaKnown RBP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.74□□□□□ -1.81
LINC02540-201ENST00000455554 TMEM176AQ96HP8 235 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 RIC8BQ9NVN3 520 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 CDC42EP3Q9UKI2 254 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 INPP5FQ9Y2H2 1132 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 MRVI1Q9Y6F6 885 aa3.74□□□□□ -1.81
LINC02540-201ENST00000455554 SLC26A4O43511 780 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 PTPN1P18031 435 aaKnown RBP3.73□□□□□ -1.81
LINC02540-201ENST00000455554 PTGS1P23219 599 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 MRE11P49959 708 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 MEOX1P50221 254 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 HDLBPQ00341 1268 aaKnown RBP3.73□□□□□ -1.81
LINC02540-201ENST00000455554 HGFACQ04756 655 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 FSTL1Q12841 308 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 CSRP2Q16527 193 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 SPTY2D1Q68D10 685 aaPredicted RBP3.73□□□□□ -1.81
LINC02540-201ENST00000455554 TRIM68Q6AZZ1 485 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 OTOP2Q7RTS6 562 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 FILIP1Q7Z7B0 1213 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 RTKN2Q8IZC4 609 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 IFNL3Q8IZI9 196 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 NLGN4XQ8N0W4 816 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 SHCBP1Q8NEM2 672 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 OR14K1Q8NGZ2 314 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 SH3RF2Q8TEC5 729 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 IPPKQ9H8X2 491 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 INCENPQ9NQS7 918 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 GALNT8Q9NY28 637 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 SRPK3Q9UPE1 567 aa3.73□□□□□ -1.81
LINC02540-201ENST00000455554 PMS2P1A4D2B8 440 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 FAM90A27PA6NNH2 459 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 ATF4P18848 351 aaPredicted RBP3.72□□□□□ -1.81
LINC02540-201ENST00000455554 ADRA1BP35368 520 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 SLC25A3Q00325 362 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 STILQ15468 1287 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 STYK1Q6J9G0 422 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 ANKRD35Q8N283 1001 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 WNK4Q96J92 1243 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 MPHOSPH9Q99550 1183 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 ALG1Q9BT22 464 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 ACBD3Q9H3P7 528 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 AGO3Q9H9G7 860 aaKnown RBP3.72□□□□□ -1.81
LINC02540-201ENST00000455554 PRKAG3Q9UGI9 489 aa3.72□□□□□ -1.81
LINC02540-201ENST00000455554 A0A0G2JNJ9 132 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 TCRBV5S4A2TA0A5A2 114 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 GJB6O95452 261 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 SSBP05455 408 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC02540-201ENST00000455554 AOAHP28039 575 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 MRPS21P82921 87 aaKnown RBP3.71□□□□□ -1.82
LINC02540-201ENST00000455554 HSP90AA2PQ14568 343 aaPredicted RBP3.71□□□□□ -1.82
LINC02540-201ENST00000455554 NTRK3Q16288 839 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 GPR150Q8NGU9 434 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 WDR48Q8TAF3 677 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 NTN5Q8WTR8 489 aaPredicted RBP3.71□□□□□ -1.82
LINC02540-201ENST00000455554 BTBD2Q9BX70 525 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 TGIF2Q9GZN2 237 aa3.71□□□□□ -1.82
LINC02540-201ENST00000455554 GPRC5BQ9NZH0 403 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms