RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 USP38Q8NB14 1042 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 OR6J1Q8NGC5 347 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ESR2Q92731 530 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 TIFAQ96CG3 184 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 VWCEQ96DN2 955 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 HSH2DQ96JZ2 352 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 NOC4LQ9BVI4 516 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ALDH8A1Q9H2A2 487 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 NKX2-4Q9H2Z4 354 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 RNF41Q9H4P4 317 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 PRDM12Q9H4Q4 367 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 GPAMQ9HCL2 828 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 VTA1Q9NP79 307 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 IL23AQ9NPF7 189 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 DIAPH3Q9NSV4 1193 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 COL20A1Q9P218 1284 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 ADD3Q9UEY8 706 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 YBX2Q9Y2T7 364 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 Q9Y3F1 56 aa5.48□□□□□ -1.53
GTF3C3-208ENST00000455546 RBM47A0AV96 593 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 SPATA31C2B4DYI2 1134 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 RFXAPO00287 272 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ZBTB39O15060 712 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 DHX16O60231 1041 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 SORBS3O60504 671 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 EIF1AXP47813 144 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 PTH1RQ03431 593 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ADGRE1Q14246 886 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 TTLL4Q14679 1199 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 RTN1Q16799 776 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 IMMTQ16891 758 aaKnown RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 QRICH1Q2TAL8 776 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 CYB5R4Q7L1T6 521 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 IQCA1Q86XH1 822 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ETFBKMTQ8IXQ9 262 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ENAHQ8N8S7 591 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 SYTL5Q8TDW5 730 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 AFG1LQ8WV93 481 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 HERVK_113Q902F9 699 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ANKS1AQ92625 1134 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 KAT14Q9H8E8 782 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 JMJD4Q9H9V9 463 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 SENP2Q9HC62 589 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 STIM2Q9P246 746 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 DNMT3LQ9UJW3 386 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 TNKSO95271 1327 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 ZMYM6O95789 1325 aa5.47□□□□□ -1.53
GTF3C3-208ENST00000455546 LAMA4Q16363 1823 aa5.46□□□□□ -1.53
GTF3C3-208ENST00000455546 LAMA2P24043 3122 aaKnown RBP5.46□□□□□ -1.53
GTF3C3-208ENST00000455546 FAM13AO94988 1023 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CFBP00751 764 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 PCP11498 1178 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 MYCLP12524 364 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 EIF2AK2P19525 551 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 ATP4AP20648 1035 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 EDNRBP24530 442 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 HOXA13P31271 388 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CPT1AP50416 773 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 PPP2R5BQ15173 497 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CTC1Q2NKJ3 1217 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 GPATCH4Q5T3I0 446 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 IFIT1BQ5T764 474 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 ARHGEF16Q5VV41 709 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CCDC62Q6P9F0 684 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 PSRC1Q6PGN9 363 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 DNAJC14Q6Y2X3 702 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 FBXO11Q86XK2 927 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 TICAM2Q86XR7 235 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 RPUSD2Q8IZ73 545 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 SCFD2Q8WU76 684 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 PIBF1Q8WXW3 757 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 MYO19Q96H55 970 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 RMDN3Q96TC7 470 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 GAS2L1Q99501 681 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 MTG1Q9BT17 334 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 BCAS3Q9H6U6 928 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 RUBCNLQ9H714 662 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CERS4Q9HA82 394 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 TIMMDC1Q9NPL8 285 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 ATP13A2Q9NQ11 1180 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 CTNNA3Q9UI47 895 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 MSRAQ9UJ68 235 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 TAF6LQ9Y6J9 622 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 PTPRSQ13332 1948 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 WDR19Q8NEZ3 1342 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 MYO7AQ13402 2215 aa5.46□□□□□ -1.54
GTF3C3-208ENST00000455546 EYSQ5T1H1 3165 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 KLRF2D3W0D1 207 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 HIP1O00291 1037 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 OPLAHO14841 1288 aa5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 PPP1R11O60927 126 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-208ENST00000455546 IQCF3P0C7M6 154 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms