RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 IGBP1P78318 339 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 RBL2Q08999 1139 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 ZNF484Q5JVG2 852 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 TRMT1LQ7Z2T5 733 aaKnown RBP16.52■□□□□ 0.24
CLCN1-203ENST00000455478 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 HSD17B14Q9BPX1 270 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 WNT8AQ9H1J5 351 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 PRO3102Q9H379 93 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 RGL1Q9NZL6 768 aa16.52■□□□□ 0.24
CLCN1-203ENST00000455478 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 SLITRK3O94933 977 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 OATP04181 439 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 TECP42680 631 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 QARSP47897 775 aaKnown RBP16.51■□□□□ 0.23
CLCN1-203ENST00000455478 CCL23P55773 120 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 PRKCEQ02156 737 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 BFSP2Q13515 415 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 BECN1Q14457 450 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 IL17AQ16552 155 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 FAM167AQ96KS9 214 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 EIF2AK1Q9BQI3 630 aaKnown RBP16.51■□□□□ 0.23
CLCN1-203ENST00000455478 NRBP2Q9NSY0 501 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 WRAP73Q9P2S5 460 aaPredicted RBP16.51■□□□□ 0.23
CLCN1-203ENST00000455478 TUBE1Q9UJT0 475 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 COL1A2P08123 1366 aa16.51■□□□□ 0.23
CLCN1-203ENST00000455478 EVPLQ92817 2033 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 POTEMA6NI47 508 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 LAD1O00515 517 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 CKBP12277 381 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
CLCN1-203ENST00000455478 CSF2RAP15509 400 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 KLRC1P26715 233 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 BMP8BP34820 402 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 PRPHP41219 470 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLCN1-203ENST00000455478 EPHB4P54760 987 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
CLCN1-203ENST00000455478 XKR3Q5GH77 459 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 TRAF7Q6Q0C0 670 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 SCLYQ96I15 445 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 NIFKQ9BYG3 293 aaKnown RBP16.5■□□□□ 0.23
CLCN1-203ENST00000455478 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
CLCN1-203ENST00000455478 PCDHA2Q9Y5H9 948 aa16.5■□□□□ 0.23
CLCN1-203ENST00000455478 TMEM150BA6NC51 233 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 IQCF3P0C7M6 154 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 SELPP16109 830 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 CYP4A11Q02928 519 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 FPGSQ05932 587 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 PKP1Q13835 747 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
CLCN1-203ENST00000455478 SCN5AQ14524 2016 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 PDIA5Q14554 519 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 TARBP2Q15633 366 aaKnown RBP16.49■□□□□ 0.23
CLCN1-203ENST00000455478 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 ANO5Q75V66 913 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 TPH2Q8IWU9 490 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 CEP89Q96ST8 783 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 LXNQ9BS40 222 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
CLCN1-203ENST00000455478 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
CLCN1-203ENST00000455478 DKC1O60832 514 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLCN1-203ENST00000455478 C22orf31O95567 290 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
CLCN1-203ENST00000455478 THPOP40225 353 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 GPNMBQ14956 572 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
CLCN1-203ENST00000455478 TMEM266Q2M3C6 531 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 TAF2Q6P1X5 1199 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 IGSF22Q8N9C0 903 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 NEK9Q8TD19 979 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLCN1-203ENST00000455478 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
CLCN1-203ENST00000455478 ZSWIM4Q9H7M6 989 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 TET1Q8NFU7 2136 aa16.48■□□□□ 0.23
CLCN1-203ENST00000455478 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
CLCN1-203ENST00000455478 ZBTB39O15060 712 aa16.47■□□□□ 0.23
CLCN1-203ENST00000455478 MED24O75448 989 aa16.47■□□□□ 0.23
CLCN1-203ENST00000455478 LYPLA2O95372 231 aa16.47■□□□□ 0.23
CLCN1-203ENST00000455478 PPIGQ13427 754 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLCN1-203ENST00000455478 PTPAQ15257 358 aa16.47■□□□□ 0.23
CLCN1-203ENST00000455478 FAM26DQ5JW98 314 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms