RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 HBP1O60381 514 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 JAK2O60674 1132 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 EFCAB14O75071 495 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 IGBP1P78318 339 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 IKBKEQ14164 716 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 INF2Q27J81 1249 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 PDXDC2PQ6P474 469 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 DNAJB3Q8WWF6 145 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 WASF1Q92558 559 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 SLC28A3Q9HAS3 691 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 PCDHA2Q9Y5H9 948 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 PCDHA10Q9Y5I2 948 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 COL1A2P08123 1366 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 PSAPP07602 524 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 KCNJ6P48051 423 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 EARS2Q5JPH6 523 aaKnown RBP16.48■□□□□ 0.23
HSPG2-207ENST00000453796 GJA10Q969M2 543 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 PRUNE2Q8WUY3 3088 aa16.48■□□□□ 0.23
HSPG2-207ENST00000453796 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 WDR64B1ANS9 1081 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 SLC37A4O43826 429 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 GAS7O60861 476 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
HSPG2-207ENST00000453796 CA3P07451 260 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 LRCH2Q5VUJ6 765 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
HSPG2-207ENST00000453796 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-207ENST00000453796 RSPH3Q86UC2 560 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-207ENST00000453796 SEPT8Q92599 483 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 TEKT3Q9BXF9 490 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 UNC45AQ9H3U1 944 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 DISC1Q9NRI5 854 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 GABBR1Q9UBS5 961 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 TCEAL9Q9UHQ7 104 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 CDY2AQ9Y6F7 541 aa16.47■□□□□ 0.23
HSPG2-207ENST00000453796 CCDC194A0A1B0GVG4 234 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-207ENST00000453796 ZNF862O60290 1169 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 GJB5O95377 273 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 FOSL2P15408 326 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 KLRC1P26715 233 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 MRPS6P82932 125 aaKnown RBP16.46■□□□□ 0.23
HSPG2-207ENST00000453796 NR5A1Q13285 461 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 LPIN1Q14693 890 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 LETM2Q2VYF4 491 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 ZNF484Q5JVG2 852 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 FBXO47Q5MNV8 452 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 PPP2R2DQ66LE6 453 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 PIK3AP1Q6ZUJ8 805 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 NEK8Q86SG6 692 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 IFIH1Q9BYX4 1025 aaKnown RBP16.46■□□□□ 0.23
HSPG2-207ENST00000453796 PRDM12Q9H4Q4 367 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 KCNMB3Q9NPA1 279 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 DDX25Q9UHL0 483 aaKnown RBP16.46■□□□□ 0.23
HSPG2-207ENST00000453796 TTC3P53804 2025 aa16.46■□□□□ 0.23
HSPG2-207ENST00000453796 COL4A4P53420 1690 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-207ENST00000453796 UNC80Q8N2C7 3258 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 FAM205CA6NFA0 338 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 MMP1P03956 469 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 GHRP10912 638 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
HSPG2-207ENST00000453796 SFNP31947 248 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 KRT2P35908 639 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 JAK3P52333 1124 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 TAP1Q03518 808 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 UGCGQ16739 394 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 APBB2Q92870 758 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-207ENST00000453796 SAMM50Q9Y512 469 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 SQORQ9Y6N5 450 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 NLRC5Q86WI3 1866 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 TRANK1O15050 2925 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 KDM3AQ9Y4C1 1321 aa16.45■□□□□ 0.22
HSPG2-207ENST00000453796 COL4A6Q14031 1691 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 CHMP2AO43633 222 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 TLL1O43897 1013 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 C22orf31O95567 290 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 ADGRE1Q14246 886 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 KRT40Q6A162 431 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 NME8Q8N427 588 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-207ENST00000453796 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-207ENST00000453796 LLPHQ9BRT6 129 aaKnown RBP16.44■□□□□ 0.22
HSPG2-207ENST00000453796 AGO3Q9H9G7 860 aaKnown RBP16.44■□□□□ 0.22
HSPG2-207ENST00000453796 TRPV2Q9Y5S1 764 aa16.44■□□□□ 0.22
HSPG2-207ENST00000453796 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
HSPG2-207ENST00000453796 STBD1O95210 358 aa16.43■□□□□ 0.22
HSPG2-207ENST00000453796 HTRA4P83105 476 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms