RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CYFIP1Q7L576 1253 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 FAM160A2Q8N612 972 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-205ENST00000453441 CYP2W1Q8TAV3 490 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 AFG1LQ8WV93 481 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 SEPT1Q8WYJ6 367 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 LENG1Q96BZ8 264 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-205ENST00000453441 HTATIP2Q9BUP3 242 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 C11orf49Q9H6J7 331 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 ZNF215Q9UL58 517 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-205ENST00000453441 MROH7Q68CQ1 1323 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 EMSYQ7Z589 1322 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 A0A0U1RQG5 324 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 WDR64B1ANS9 1081 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 DHX15O43143 795 aaKnown RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 DKC1O60832 514 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ATP9AO75110 1047 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ASGR1P07306 291 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ZSCAN22P10073 491 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 EN2P19622 333 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 PRPHP41219 470 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 SOX10P56693 466 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 PURAQ00577 322 aaKnown RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 PTPN11Q06124 597 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ITGB3BPQ13352 177 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 KCNA10Q16322 511 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 FAM160B1Q5W0V3 765 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ATL3Q6DD88 541 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 UBE2Q1Q7Z7E8 422 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 COPS5Q92905 334 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 GPR20Q99678 358 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 USB1Q9BQ65 265 aaKnown RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 RAB34Q9BZG1 259 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 AZI2Q9H6S1 392 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 STARD7Q9NQZ5 370 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 PCDHA10Q9Y5I2 948 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 ATP6V1DQ9Y5K8 247 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 MORC2Q9Y6X9 1032 aaPredicted RBP9.82□□□□□ -0.84
COL28A1-205ENST00000453441 SCN10AQ9Y5Y9 1956 aa9.82□□□□□ -0.84
COL28A1-205ENST00000453441 A0A1W2PQ45 241 aaPredicted RBP9.81□□□□□ -0.84
COL28A1-205ENST00000453441 A0A1W2PQY0 241 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 MYADML2A6NDP7 307 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 SLC37A4O43826 429 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 LGR5O75473 907 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PSMD10O75832 226 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 ATG7O95352 703 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 F2P00734 622 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 LGALS2P05162 132 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PSAPP07602 524 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 MYL3P08590 195 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 TCF7P36402 384 aaPredicted RBP9.81□□□□□ -0.84
COL28A1-205ENST00000453441 RGS19P49795 217 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 ACTR2P61160 394 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 NUCB2P80303 420 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 RESTQ13127 1097 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 TMEM266Q2M3C6 531 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 HSDL1Q3SXM5 330 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 ARL6IP4Q66PJ3 421 aaKnown RBP9.81□□□□□ -0.84
COL28A1-205ENST00000453441 NFRKBQ6P4R8 1299 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PLPPR4Q7Z2D5 763 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 NEK9Q8TD19 979 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 HLA-CQ95604 372 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PAWRQ96IZ0 340 aaKnown RBP9.81□□□□□ -0.84
COL28A1-205ENST00000453441 ZNF396Q96N95 335 aaPredicted RBP9.81□□□□□ -0.84
COL28A1-205ENST00000453441 MTMR9Q96QG7 549 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 SMARCAD1Q9H4L7 1026 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 PCDHA12Q9UN75 941 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 DOCK5Q9H7D0 1870 aa9.81□□□□□ -0.84
COL28A1-205ENST00000453441 IGKV6D-21A0A0A0MT36 114 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 GSTTP1A0A1W2PQM5 241 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 F13A1P00488 732 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 MCM7P33993 719 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 TOB1P50616 345 aaPredicted RBP9.8□□□□□ -0.84
COL28A1-205ENST00000453441 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
COL28A1-205ENST00000453441 BEX3Q00994 111 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 SNX17Q15036 470 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 TMEM63BQ5T3F8 832 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 B3GNT9Q6UX72 402 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 CXCL17Q6UXB2 119 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 SESTD1Q86VW0 696 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 HAS1Q92839 578 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 FAM167AQ96KS9 214 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 SENP6Q9GZR1 1112 aaPredicted RBP9.8□□□□□ -0.84
COL28A1-205ENST00000453441 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 ERAP1Q9NZ08 941 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
COL28A1-205ENST00000453441 MYH9P35579 1960 aaKnown RBP9.8□□□□□ -0.84
COL28A1-205ENST00000453441 H3BRB1 525 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 ARVCFO00192 962 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 HAS3O00219 553 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 BACH1O14867 736 aa9.79□□□□□ -0.84
COL28A1-205ENST00000453441 TLR3O15455 904 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms