RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 ZNF34Q8IZ26 560 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 PHACTR3Q96KR7 559 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 PRDM14Q9GZV8 571 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 DBNDD1Q9H9R9 158 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 LAMB2P55268 1798 aa8.6□□□□□ -1.03
COPS7B-216ENST00000452375 NUDT19A8MXV4 375 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 H0YGN5 161 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 BBOX1O75936 387 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 GARTP22102 1010 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 CWF19L2Q2TBE0 894 aaKnown RBP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 HSF5Q4G112 596 aaPredicted RBP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 CNKSR3Q6P9H4 555 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 MZB1Q8WU39 189 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 TMX4Q9H1E5 349 aaPredicted RBP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 COPRSQ9NQ92 184 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 SCAF8Q9UPN6 1271 aaKnown RBP8.59□□□□□ -1.03
COPS7B-216ENST00000452375 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
COPS7B-216ENST00000452375 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
COPS7B-216ENST00000452375 HRKO00198 91 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 RPS12P25398 132 aaKnown RBP8.58□□□□□ -1.04
COPS7B-216ENST00000452375 NCKAP1LP55160 1127 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 FKBP1BP68106 108 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 RAB3GAP1Q15042 981 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 SKOR2Q2VWA4 1001 aaPredicted RBP8.58□□□□□ -1.04
COPS7B-216ENST00000452375 SLC10A5Q5PT55 438 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 MCM10Q7L590 875 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 TMEFF1Q8IYR6 380 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 CDADC1Q9BWV3 514 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 ADAM7Q9H2U9 754 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 GMIPQ9P107 970 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 LAMB4A4D0S4 1761 aa8.58□□□□□ -1.04
COPS7B-216ENST00000452375 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
COPS7B-216ENST00000452375 MPOP05164 745 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 YBX1P67809 324 aaKnown RBP8.57□□□□□ -1.04
COPS7B-216ENST00000452375 CAP1Q01518 475 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 PRAMEF18Q5VWM3 479 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 OLFML2BQ68BL8 750 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 PRRT2Q7Z6L0 340 aaPredicted RBP8.57□□□□□ -1.04
COPS7B-216ENST00000452375 ARMC5Q96C12 935 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
COPS7B-216ENST00000452375 TRAIPQ9BWF2 469 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 KLHL14Q9P2G3 628 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 RRP7AQ9Y3A4 280 aaKnown RBP8.57□□□□□ -1.04
COPS7B-216ENST00000452375 KNSTRNQ9Y448 316 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 ANKRD36CQ5JPF3 1778 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 LRRC37AA6NMS7 1700 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 LAMA3Q16787 3333 aa8.57□□□□□ -1.04
COPS7B-216ENST00000452375 COL4A1P02462 1669 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 FADS2P1A8MWK0 482 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 U2SURPO15042 1029 aaKnown RBP8.56□□□□□ -1.04
COPS7B-216ENST00000452375 SIGLEC6O43699 453 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 ECE2O60344 883 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 CLEC3AO75596 197 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
COPS7B-216ENST00000452375 PRKCAP17252 672 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 ERVFRD-1P60508 538 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 GRAPQ13588 217 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 DCTN1Q14203 1278 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 GALNT18Q6P9A2 607 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 FAM129CQ86XR2 697 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 NUP43Q8NFH3 380 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
COPS7B-216ENST00000452375 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 GFOD1Q9NXC2 390 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 POLLQ9UGP5 575 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 PTPN22Q9Y2R2 807 aa8.56□□□□□ -1.04
COPS7B-216ENST00000452375 IRS4O14654 1257 aaPredicted RBP8.55□□□□□ -1.04
COPS7B-216ENST00000452375 MYL6BP14649 208 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 ARL4AP40617 200 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 ZNF280AP59817 542 aaPredicted RBP8.55□□□□□ -1.04
COPS7B-216ENST00000452375 IGDCC3Q8IVU1 814 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 CXorf38Q8TB03 319 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 PWWP2AQ96N64 755 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 UTP14AQ9BVJ6 771 aaKnown RBP8.55□□□□□ -1.04
COPS7B-216ENST00000452375 MKRN2Q9H000 416 aaKnown RBP8.55□□□□□ -1.04
COPS7B-216ENST00000452375 TNFRSF10DQ9UBN6 386 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 FBXL21Q9UKT6 434 aa8.55□□□□□ -1.04
COPS7B-216ENST00000452375 WTIPA6NIX2 430 aaPredicted RBP8.54□□□□□ -1.04
COPS7B-216ENST00000452375 ABLIM1O14639 778 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 CELA3BP08861 270 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 PRKAR2BP31323 418 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 GPSM2P81274 684 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 CYP4F8P98187 520 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 GK5Q6ZS86 529 aa8.54□□□□□ -1.04
COPS7B-216ENST00000452375 DDX46Q7L014 1031 aaKnown RBP8.54□□□□□ -1.04
COPS7B-216ENST00000452375 FBXO33Q7Z6M2 555 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms