RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 RIPOR3Q96MK2 946 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 NECTIN4Q96NY8 510 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 CELF4Q9BZC1 486 aaKnown RBP7.57□□□□□ -1.2
PMS1-217ENST00000450931 ELAC1Q9H777 363 aaKnown RBP7.57□□□□□ -1.2
PMS1-217ENST00000450931 PADI3Q9ULW8 664 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 UBIAD1Q9Y5Z9 338 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 COL1A2P08123 1366 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 NFASCO94856 1347 aa7.57□□□□□ -1.2
PMS1-217ENST00000450931 LAG3P18627 525 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 VCPP55072 806 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 PLCB3Q01970 1234 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 ANKRD54Q6NXT1 300 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 CWC27Q6UX04 472 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 CYB5R4Q7L1T6 521 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 PLPPR4Q7Z2D5 763 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 GLG1Q92896 1179 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 RRP36Q96EU6 259 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 S1PR5Q9H228 398 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 NGRNQ9NPE2 291 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 RTEL1Q9NZ71 1219 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 MEIS2O14770 477 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 DDAH1O94760 285 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 KIF5BP33176 963 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 GNAQP50148 359 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 WTAPQ15007 396 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 CATIPQ7Z7H3 387 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 RSPH1Q8WYR4 309 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 AZI2Q9H6S1 392 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 ERVK-5Q9HDB9 667 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 RGS18Q9NS28 235 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 SORCS3Q9UPU3 1222 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 SUPT16HQ9Y5B9 1047 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 PCDHB7Q9Y5E2 793 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 IFIT3O14879 490 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 HOXA2O43364 376 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 FGF18O76093 207 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 INSRRP14616 1297 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 PPM1AP35813 382 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 MTMR1Q13613 665 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 MTMR3Q13615 1198 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 TPRNQ4KMQ1 711 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 DIEXFQ68CQ4 756 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 COLGALT1Q8NBJ5 622 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 CASP10Q92851 521 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 RPGRIP1Q96KN7 1286 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 JADE2Q9NQC1 790 aa7.56□□□□□ -1.2
PMS1-217ENST00000450931 SEC63Q9UGP8 760 aaKnown RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
PMS1-217ENST00000450931 ITIH3Q06033 890 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 RALYLQ86SE5 291 aaKnown RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 ZNF710Q8N1W2 664 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 VN1R2Q8NFZ6 395 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 CTCFLQ8NI51 663 aaPredicted RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 MRPS27Q92552 414 aaKnown RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 JPH1Q9HDC5 661 aaPredicted RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 PUF60Q9UHX1 559 aaKnown RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 TELO2Q9Y4R8 837 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 PRR23AA6NEV1 266 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 ATP9AO75110 1047 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 ITGB5P18084 799 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 MARK3P27448 753 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 KRT76Q01546 638 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 SP4Q02446 784 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 RBM23Q86U06 439 aaKnown RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 CHD1LQ86WJ1 897 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 NCOA7Q8NI08 942 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 FAM49AQ9H0Q0 323 aaPredicted RBP7.55□□□□□ -1.2
PMS1-217ENST00000450931 SLC9A2Q9UBY0 812 aa7.55□□□□□ -1.2
PMS1-217ENST00000450931 C9IYK1 514 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 GPR182O15218 404 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 MTHFRP42898 656 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 PLCB4Q15147 1175 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 USP17L6PQ6QN14 398 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 ZDHHC14Q8IZN3 488 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 MICAL1Q8TDZ2 1067 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 PCYT2Q99447 389 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 TRPC6Q9Y210 931 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 ATG7O95352 703 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 TECP42680 631 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 CLCN5P51795 746 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 FAM189BP81408 668 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 NUCB1Q02818 461 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 SPOUT1Q5T280 376 aaKnown RBP7.54□□□□□ -1.2
PMS1-217ENST00000450931 SYCE2Q6PIF2 218 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 MTHFD1LQ6UB35 978 aa7.54□□□□□ -1.2
PMS1-217ENST00000450931 SDF4Q9BRK5 362 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms