RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 MMP1P03956 469 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 INSRRP14616 1297 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 GSPT1P15170 499 aaKnown RBP11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 KCNA2P16389 499 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 RXRAP19793 462 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 CHMLP26374 656 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 NRIP1P48552 1158 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 ANTXR2P58335 489 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 PAK2Q13177 524 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 RAB11FIP4Q86YS3 637 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 CMTR2Q8IYT2 770 aaKnown RBP11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 CLP1Q92989 425 aaKnown RBP11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 FTHL17Q9BXU8 183 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 GINS2Q9Y248 185 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
SPTLC3-204ENST00000450297 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 TBX10O75333 385 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 RPLP2P05387 115 aaKnown RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 SCG2P13521 617 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 ADAM15Q13444 863 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 TMTC2Q8N394 836 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 POF1BQ8WVV4 589 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 ZNF689Q96CS4 500 aaPredicted RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 TLE6Q9H808 572 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 JADE2Q9NQC1 790 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 PADI3Q9ULW8 664 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 UBIAD1Q9Y5Z9 338 aa11.05□□□□□ -0.64
SPTLC3-204ENST00000450297 MYH7BA7E2Y1 1941 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 BACH1O14867 736 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 ITGB1P05556 798 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 CALM1P0DP23 149 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 CALM2P0DP24 149 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 CALM3P0DP25 149 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 DNAJB1P25685 340 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 PDE4AP27815 886 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 MCM5P33992 734 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 GATMP50440 423 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 STAT5BP51692 787 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 KRT76Q01546 638 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 RTN4RL1Q86UN2 441 aaPredicted RBP11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 SUGP1Q8IWZ8 645 aaKnown RBP11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 EFHBQ8N7U6 833 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 LINC01599Q8WXQ3 324 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 EDAQ92838 391 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 P2RX5Q93086 422 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 KCNH6Q9H252 994 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 RC3H2Q9HBD1 1191 aaKnown RBP11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 AAASQ9NRG9 546 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 SLC9A2Q9UBY0 812 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHB12Q9Y5F1 795 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 SLC12A7Q9Y666 1083 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
SPTLC3-204ENST00000450297 DENND3A2RUS2 1198 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 M0R296 226 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 DDX39AO00148 427 aaKnown RBP11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 MAFGO15525 162 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 SGSM2O43147 1006 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 ZNF76P36508 570 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 ACTR2P61160 394 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 CAMK1Q14012 370 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 BARX2Q9UMQ3 279 aaPredicted RBP11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
SPTLC3-204ENST00000450297 PCDHA2Q9Y5H9 948 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms