RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 SLC16A2P36021 539 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 NOP2P46087 812 aaKnown RBP12.59□□□□□ -0.39
GNE-203ENST00000447283 PSMD2Q13200 908 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 HGSNATQ68CP4 663 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
GNE-203ENST00000447283 SYN2Q92777 582 aaPredicted RBP12.59□□□□□ -0.39
GNE-203ENST00000447283 CDCA5Q96FF9 252 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 NOX5Q96PH1 765 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 PIGSQ96S52 555 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
GNE-203ENST00000447283 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 PLEKHA4Q9H4M7 779 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 SALL4Q9UJQ4 1053 aa12.59□□□□□ -0.39
GNE-203ENST00000447283 MYH4Q9Y623 1939 aa12.58□□□□□ -0.39
GNE-203ENST00000447283 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 SSC5DA1L4H1 1573 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 CPP00450 1065 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 PTPRAP18433 802 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 TXKP42681 527 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 PDIA5Q14554 519 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.4
GNE-203ENST00000447283 CALCRLQ16602 461 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 TMEM266Q2M3C6 531 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 KLHDC7AQ5VTJ3 777 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
GNE-203ENST00000447283 RAD54LQ92698 747 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 CAPS2Q9BXY5 557 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 NUCKS1Q9H1E3 243 aaKnown RBP12.58□□□□□ -0.4
GNE-203ENST00000447283 AS3MTQ9HBK9 375 aa12.58□□□□□ -0.4
GNE-203ENST00000447283 A6NNZ2 444 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 SKOR1P84550 965 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 TUBB8Q3ZCM7 444 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 TTC31Q49AM3 519 aaPredicted RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 KIAA1755Q5JYT7 1200 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 NOL9Q5SY16 702 aaKnown RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 C8orf74Q6P047 294 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 TSG101Q99816 390 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 WDR18Q9BV38 432 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 RAB34Q9BZG1 259 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 BIN2Q9UBW5 565 aaPredicted RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 ZHX2Q9Y6X8 837 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 GRIN2DO15399 1336 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 PNMA6FA0A0J9YX94 578 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 EIF3HO15372 352 aaKnown RBP eCLIP12.57□□□□□ -0.4
GNE-203ENST00000447283 NCK2O43639 380 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 CXCR5P32302 372 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 ZCWPW2Q504Y3 356 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 ZNF280CQ8ND82 737 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 RBM12Q9NTZ6 932 aaKnown RBP12.57□□□□□ -0.4
GNE-203ENST00000447283 CEP72Q9P209 647 aa12.57□□□□□ -0.4
GNE-203ENST00000447283 A0A087WUV0 522 aaPredicted RBP12.56□□□□□ -0.4
GNE-203ENST00000447283 HSF2BPO75031 334 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
GNE-203ENST00000447283 STAT2P52630 851 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 GFPT1Q06210 699 aaPredicted RBP12.56□□□□□ -0.4
GNE-203ENST00000447283 SPP2Q13103 211 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
GNE-203ENST00000447283 BTNL9Q6UXG8 535 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 CACNA2D4Q7Z3S7 1137 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 LPAR1Q92633 364 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 DDX12PQ92771 950 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 GDF3Q9NR23 364 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 SMARCAL1Q9NZC9 954 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 EHD2Q9NZN4 543 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 CSADQ9Y600 493 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 ZBTB5O15062 677 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 SLC37A4O43826 429 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 EDIL3O43854 480 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 SERPING1P05155 500 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 APBA1Q02410 837 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
GNE-203ENST00000447283 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 TTMPQ5BVD1 217 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 IFT20Q8IY31 132 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 RUFY1Q96T51 708 aa12.56□□□□□ -0.4
GNE-203ENST00000447283 PSMB7Q99436 277 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms