RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TMC5Q6UXY8 1006 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 LHFPL2Q6ZUX7 228 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 GPR101Q96P66 508 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 TMEM209Q96SK2 561 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 AMNQ9BXJ7 453 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 IFT22Q9H7X7 185 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 DLL4Q9NR61 685 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 SPATA6Q9NWH7 488 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 CNOT6Q9ULM6 557 aaKnown RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 PMF1-BGLAPU3KQ54 211 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 GOLGA6L22H0YM25 854 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 BRINP1O60477 761 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 CYP17A1P05093 508 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 PTGS1P23219 599 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 CNGA1P29973 690 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 TXKP42681 527 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 RAP1GAPP47736 663 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 KPNA1P52294 538 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 PHC1P78364 1004 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 OCRLQ01968 901 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 STAT4Q14765 748 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF174Q15697 407 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 SKIDA1Q1XH10 827 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 CT47A1Q5JQC4 288 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 GPR158Q5T848 1215 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 CCDC181Q5TID7 509 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 CNKSR3Q6P9H4 555 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 DDX42Q86XP3 938 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 IGDCC4Q8TDY8 1250 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 USP7Q93009 1102 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 TTC1Q99614 292 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 SLC39A2Q9NP94 309 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 APOBEC2Q9Y235 224 aaKnown RBP6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 ASB1Q9Y576 335 aa6.08□□□□□ -1.44
HMGB1P48-201ENST00000446155 NPIPB6E9PJ23 425 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 GPR39O43194 453 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 IL18BPO95998 194 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 COL6A1P12109 1028 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 IL2P60568 153 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 LRRC32Q14392 662 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF124Q15973 351 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 STK32CQ86UX6 486 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 TTLL6Q8N841 843 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZBTB8AQ96BR9 441 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 PCIF1Q9H4Z3 704 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 KCND1Q9NSA2 647 aa6.07□□□□□ -1.44
HMGB1P48-201ENST00000446155 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 ADAMTS20P59510 1910 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 SH3D21A4FU49 640 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 PARNO95453 639 aaKnown RBP6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 CDKN1CP49918 316 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 SART3Q15020 963 aaKnown RBP6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 STILQ15468 1287 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 TERF2Q15554 542 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 ATP13A4Q4VNC1 1196 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 C1QL4Q86Z23 238 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 SCYL1Q96KG9 808 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 PWWP2AQ96N64 755 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 WRNIP1Q96S55 665 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 ARHGAP28Q9P2N2 729 aa6.06□□□□□ -1.44
HMGB1P48-201ENST00000446155 PRAMEF22A3QJZ6 481 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 RFXAPO00287 272 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 FFAR3O14843 346 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 MAFO75444 373 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 CPEP16870 476 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF28P17035 718 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 RPL13P26373 211 aaKnown RBP6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ALDH6A1Q02252 535 aaKnown RBP6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 SMAD4Q13485 552 aaKnown RBP6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 PLEKHG6Q3KR16 790 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF385BQ569K4 471 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 PRAMEF18Q5VWM3 479 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 LRSAM1Q6UWE0 723 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 CERS3Q8IU89 383 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZNF610Q8N9Z0 462 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 TP53I13Q8NBR0 393 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 SLC5A5Q92911 643 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZSWIM3Q96MP5 696 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 FOXB1Q99853 325 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 TOMM22Q9NS69 142 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 GALNT8Q9NY28 637 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 MCM8Q9UJA3 840 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 ZFP69BQ9UJL9 534 aa6.05□□□□□ -1.44
HMGB1P48-201ENST00000446155 KNG1P01042 644 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 PRLP01236 227 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 CHGBP05060 677 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 MOGSQ13724 837 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 PHF19Q5T6S3 580 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 KANK2Q63ZY3 851 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 NME9Q86XW9 330 aa6.04□□□□□ -1.44
HMGB1P48-201ENST00000446155 SPATS2Q86XZ4 545 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms