RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 SORBS3O60504 671 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 FOXD2O60548 495 aaPredicted RBP11.98□□□□□ -0.49
HDAC8-215ENST00000444609 CD52P31358 61 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 LIMK1P53667 647 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
HDAC8-215ENST00000444609 LPAL2Q16609 132 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 CWH43Q9H720 699 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 RAB23Q9ULC3 237 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 WASF3Q9UPY6 502 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 BPTFQ12830 3046 aa11.98□□□□□ -0.49
HDAC8-215ENST00000444609 TBKBP1A7MCY6 615 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 N4BP1O75113 896 aaKnown RBP11.97□□□□□ -0.49
HDAC8-215ENST00000444609 CHGBP05060 677 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 LGALS2P05162 132 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 LAG3P18627 525 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
HDAC8-215ENST00000444609 ARHGAP4P98171 946 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 KRT17Q04695 432 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 TSSK4Q6SA08 328 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 CELF5Q8N6W0 485 aaKnown RBP11.97□□□□□ -0.49
HDAC8-215ENST00000444609 LMBR1Q8WVP7 490 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 GATA6Q92908 595 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 SHDQ96IW2 340 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
HDAC8-215ENST00000444609 FAM126AQ9BYI3 521 aaPredicted RBP11.97□□□□□ -0.49
HDAC8-215ENST00000444609 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
HDAC8-215ENST00000444609 NBEAQ8NFP9 2946 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 KCNK5O95279 499 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 GGPS1O95749 300 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 EPCAMP16422 314 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 TFAP4Q01664 338 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 UBE3CQ15386 1083 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 LETM2Q2VYF4 491 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 AACSQ86V21 672 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 SYTL5Q8TDW5 730 aaPredicted RBP11.96□□□□□ -0.49
HDAC8-215ENST00000444609 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.49
HDAC8-215ENST00000444609 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 RMDN3Q96TC7 470 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 MAF1Q9H063 256 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 SLC2A4RGQ9NR83 387 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 RXFP3Q9NSD7 469 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 COL20A1Q9P218 1284 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 CDY2AQ9Y6F7 541 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
HDAC8-215ENST00000444609 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 KANSL1LA0AUZ9 987 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 BCAR3O75815 825 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 MAGEA9P43362 315 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 SARSP49591 514 aaKnown RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 SP2Q02086 613 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 KCNV1Q6PIU1 500 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 CABP7Q86V35 215 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 SLC22A17Q8WUG5 538 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 STRBPQ96SI9 672 aaKnown RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 OSBPL6Q9BZF3 934 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 PUS7LQ9H0K6 701 aaKnown RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 EPS15L1Q9UBC2 864 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 PADI3Q9ULW8 664 aa11.95□□□□□ -0.5
HDAC8-215ENST00000444609 MTF2Q9Y483 593 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 DSPP15924 2871 aaKnown RBP11.95□□□□□ -0.5
HDAC8-215ENST00000444609 MYH4Q9Y623 1939 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 NR3C2P08235 984 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 PDE4AP27815 886 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 KCNT2Q6UVM3 1135 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 ADAM32Q8TC27 787 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 DNAJB3Q8WWF6 145 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 GLG1Q92896 1179 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 MYL10Q9BUA6 226 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDAC8-215ENST00000444609 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 SFXN1Q9H9B4 322 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 MLXIPQ9HAP2 919 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 PRMT8Q9NR22 394 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-215ENST00000444609 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
HDAC8-215ENST00000444609 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 CXCL14O95715 111 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
HDAC8-215ENST00000444609 SPINK2P20155 84 aa11.93□□□□□ -0.5
HDAC8-215ENST00000444609 IBSPP21815 317 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-215ENST00000444609 PPM1AP35813 382 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms