RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 ARHGAP4P98171 946 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 PLCB3Q01970 1234 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.274e-7■■■■■ 30.9
SYNCRIP-203ENST00000444272 DCLRE1AQ6PJP8 1040 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 TSSK4Q6SA08 328 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 AACSQ86V21 672 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 TMEM121BQ9BXQ6 578 aaPredicted RBP16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 BCO2Q9BYV7 579 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 TYW1Q9NV66 732 aaKnown RBP16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
SYNCRIP-203ENST00000444272 C2orf71A6NGG8 1288 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 LRP3O75074 770 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 LGALS2P05162 132 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 CA8P35219 290 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 LAIR1Q6GTX8 287 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 SLC44A3Q8N4M1 653 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 LMBR1Q8WVP7 490 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 NELL1Q92832 810 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 KIF12Q96FN5 646 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 FTHL17Q9BXU8 183 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 STX8Q9UNK0 236 aa16.71■□□□□ 0.27
SYNCRIP-203ENST00000444272 BCAR3O75815 825 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 GGPS1O95749 300 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 ADAM17P78536 824 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 CSRP2Q16527 193 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 CELF3Q5SZQ8 465 aaKnown RBP16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 MRPL43Q8N983 215 aaKnown RBP16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 ANKFY1Q9P2R3 1169 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 MYH7P12883 1935 aa16.7■□□□□ 0.26
SYNCRIP-203ENST00000444272 RETP07949 1114 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 EPCAMP16422 314 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 LAG3P18627 525 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 PTPN14Q15678 1187 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 ZCCHC14Q8WYQ9 949 aaKnown RBP16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 MAP4K1Q92918 833 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 CWH43Q9H720 699 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 NRCAMQ92823 1304 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 KAT6AQ92794 2004 aa16.69■□□□□ 0.26
SYNCRIP-203ENST00000444272 N4BP1O75113 896 aaKnown RBP16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 SPINK2P20155 84 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 TFAP4Q01664 338 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 FAM102BQ5T8I3 360 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 GPR149Q86SP6 731 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 RMDN3Q96TC7 470 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 ADAM33Q9BZ11 813 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 PCDHB7Q9Y5E2 793 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 ADAMTS20P59510 1910 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
SYNCRIP-203ENST00000444272 TM4SF5O14894 197 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 EIF2AK2P19525 551 aaKnown RBP16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 STARD6P59095 220 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 LETM2Q2VYF4 491 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 USH1GQ495M9 461 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 BTNL9Q6UXG8 535 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 SYTL5Q8TDW5 730 aaPredicted RBP16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.266e-14■■■■■ 27.2
SYNCRIP-203ENST00000444272 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 FREM2Q5SZK8 3169 aa16.67■□□□□ 0.26
SYNCRIP-203ENST00000444272 GSG1L2A8MUP6 293 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 KCNK5O95279 499 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 GBP2P32456 591 aaPredicted RBP16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 PBX3P40426 434 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 KRT17Q04695 432 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 FOXC1Q12948 553 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 ARHGEF16Q5VV41 709 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 TAF2Q6P1X5 1199 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 CABP7Q86V35 215 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 DCAF4Q8WV16 495 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 MLXIPQ9HAP2 919 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 PADI3Q9ULW8 664 aa16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
SYNCRIP-203ENST00000444272 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 UBA1P22314 1058 aaKnown RBP16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 PDE4AP27815 886 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 SARSP49591 514 aaKnown RBP16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 SP2Q02086 613 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 TRIM50Q86XT4 487 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 RGS22Q8NE09 1264 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 GATA6Q92908 595 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 SHDQ96IW2 340 aa16.65■□□□□ 0.26
SYNCRIP-203ENST00000444272 MYL10Q9BUA6 226 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms