RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 DNAJB3Q8WWF6 145 aa21.31■■□□□ 1
ATPAF2-201ENST00000444058 BBXQ8WY36 941 aaPredicted RBP21.31■■□□□ 1
ATPAF2-201ENST00000444058 PRDM12Q9H4Q4 367 aa21.31■■□□□ 1
ATPAF2-201ENST00000444058 KCNJ14Q9UNX9 436 aa21.31■■□□□ 1
ATPAF2-201ENST00000444058 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 AMHP03971 560 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 FDPSP14324 419 aaKnown RBP21.3■■□□□ 1
ATPAF2-201ENST00000444058 SFNP31947 248 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 ZNF484Q5JVG2 852 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 MTHFD1LQ6UB35 978 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 USP38Q8NB14 1042 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 RAD9AQ99638 391 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 ZBED2Q9BTP6 218 aa21.3■■□□□ 1
ATPAF2-201ENST00000444058 IFIH1Q9BYX4 1025 aaKnown RBP21.3■■□□□ 1
ATPAF2-201ENST00000444058 CCDC194A0A1B0GVG4 234 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 GAS7O60861 476 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 ATP4AP20648 1035 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 JAK3P52333 1124 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 MRPS6P82932 125 aaKnown RBP21.29■■□□□ 1
ATPAF2-201ENST00000444058 LRCH2Q5VUJ6 765 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 NECAB1Q8N987 351 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 RDM1Q8NG50 284 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 FAM167AQ96KS9 214 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 UIMC1Q96RL1 719 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 TEKT3Q9BXF9 490 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 OSBPL7Q9BZF2 842 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 DISC1Q9NRI5 854 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 CEP131Q9UPN4 1083 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 SAMM50Q9Y512 469 aa21.29■■□□□ 1
ATPAF2-201ENST00000444058 PSMD10O75832 226 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 LARGE1O95461 756 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 TDP2O95551 362 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 GCFC2P16383 781 aaKnown RBP21.28■■□□□ 1
ATPAF2-201ENST00000444058 TAP1Q03518 808 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 LPIN1Q14693 890 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 FBXO47Q5MNV8 452 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 PPP4R3AQ6IN85 833 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.28■■□□□ 1
ATPAF2-201ENST00000444058 NSUN7Q8NE18 718 aaKnown RBP21.28■■□□□ 1
ATPAF2-201ENST00000444058 TRAPPC12Q8WVT3 735 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 NAP1L4Q99733 375 aaKnown RBP21.28■■□□□ 1
ATPAF2-201ENST00000444058 FAM49AQ9H0Q0 323 aaPredicted RBP21.28■■□□□ 1
ATPAF2-201ENST00000444058 LIMCH1Q9UPQ0 1083 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 CDY2AQ9Y6F7 541 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 IGSF9BQ9UPX0 1349 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 KDM3AQ9Y4C1 1321 aa21.28■■□□□ 1
ATPAF2-201ENST00000444058 ZBTB42B2RXF5 422 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 M0QZ92 97 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 KLRC1P26715 233 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 INF2Q27J81 1249 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 B3GNT9Q6UX72 402 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 NEK8Q86SG6 692 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 CKAP2LQ8IYA6 745 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 ETNPPLQ8TBG4 499 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 GABBR1Q9UBS5 961 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 DDX25Q9UHL0 483 aaKnown RBP21.27■■□□□ 1
ATPAF2-201ENST00000444058 INSL6Q9Y581 213 aa21.27■■□□□ 1
ATPAF2-201ENST00000444058 GHRP10912 638 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 POU3F3P20264 500 aaPredicted RBP21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 HTRA4P83105 476 aaPredicted RBP21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 ADGRE1Q14246 886 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 TSHZ1Q6ZSZ6 1077 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 TMCO2Q7Z6W1 182 aaPredicted RBP21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 MYOCDQ8IZQ8 938 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 TOP1MTQ969P6 601 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 ZBTB10Q96DT7 871 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 BRMS1Q9HCU9 246 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 GJB4Q9NTQ9 266 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 TRPV2Q9Y5S1 764 aa21.26■□□□□ 0.99
ATPAF2-201ENST00000444058 PTPRSQ13332 1948 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 RBM25P49756 843 aaKnown RBP21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 LETM2Q2VYF4 491 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 IL27Q8NEV9 243 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 OXER1Q8TDS5 423 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 FAM20AQ96MK3 541 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 KIF2CQ99661 725 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 CELF4Q9BZC1 486 aaKnown RBP21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 UNC45AQ9H3U1 944 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 KCNMB3Q9NPA1 279 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 NRBP2Q9NSY0 501 aa21.25■□□□□ 0.99
ATPAF2-201ENST00000444058 MYO9BQ13459 2157 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 MICAL3Q7RTP6 2002 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 TBX3O15119 743 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 MAGEB2O15479 319 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 C22orf31O95567 290 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 KRT2P35908 639 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 PIK3AP1Q6ZUJ8 805 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 KIAA0319LQ8IZA0 1049 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 SP7Q8TDD2 431 aaPredicted RBP21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 FTHL17Q9BXU8 183 aa21.24■□□□□ 0.99
ATPAF2-201ENST00000444058 LCHNA4D1U4 455 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 ZNF862O60290 1169 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 ARHGEF15O94989 841 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 OATP04181 439 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 MIER3Q7Z3K6 550 aa21.23■□□□□ 0.99
ATPAF2-201ENST00000444058 TNFRSF25Q93038 417 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms