RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 FOXN1O15353 648 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ASAP2O43150 1006 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 DTNBO60941 627 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 N4BP1O75113 896 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TBCAO75347 108 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MED24O75448 989 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 LCA5LO95447 670 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 LDHAP00338 332 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PIGRP01833 764 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PSAPP07602 524 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC175P0C221 793 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PRR29P0C7W0 189 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SKILP12757 684 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ALAS1P13196 640 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PLS3P13797 630 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CD44P16070 742 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KCNA2P16389 499 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 YBX3P16989 372 aaKnown RBP eCLIP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PSMC2P35998 433 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 RFC5P40937 340 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 RARRES1P49788 294 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 EFNA5P52803 228 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 AP3M2P53677 418 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SMTNP53814 917 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 HMGCS2P54868 508 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NCKAP1LP55160 1127 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 HERVK_113P62684 666 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KRT83P78385 493 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 IRX3P78415 501 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ZBED6P86452 979 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CCZ1BP86790 482 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CCZ1P86791 482 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 GTF2BQ00403 316 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CETN1Q12798 172 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 COASYQ13057 564 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 BAATQ14032 418 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KCNJ12Q14500 433 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TMEM132BQ14DG7 1078 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KRT31Q15323 416 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 FAM110CQ1W6H9 321 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ARSHQ5FYA8 562 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 XKR3Q5GH77 459 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 HERC4Q5GLZ8 1057 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SNRNP48Q6IEG0 339 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PPP1R2P3Q6NXS1 205 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MIS18BP1Q6P0N0 1132 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 POTEHQ6S545 545 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 METTL7BQ6UX53 244 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ABHD15Q6UXT9 468 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CYP26C1Q6V0L0 522 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 LRRC55Q6ZSA7 311 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NYAP1Q6ZVC0 841 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 INTS8Q75QN2 995 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 RASGRP2Q7LDG7 609 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 HS2ST1Q7LGA3 356 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PLPPR4Q7Z2D5 763 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MIER3Q7Z3K6 550 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MTERF4Q7Z6M4 381 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 GPBP1Q86WP2 473 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TRIM59Q8IWR1 403 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 FAM178BQ8IXR5 827 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ANKRD35Q8N283 1001 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 C2orf69Q8N8R5 385 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TC2NQ8N9U0 490 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA0895Q8NCT3 520 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 EHBP1Q8NDI1 1231 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CACTINQ8WUQ7 758 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ZKSCAN4Q969J2 545 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ATG4CQ96DT6 458 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SLC10A4Q96EP9 437 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 CDCA5Q96FF9 252 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TRIM47Q96LD4 638 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 AGBL1Q96MI9 1066 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NAP1L5Q96NT1 182 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TSPAN18Q96SJ8 248 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NUP88Q99567 741 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ARID3AQ99856 593 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 BAG1Q99933 345 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 DUSP9Q99956 384 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 GLIS2Q9BZE0 524 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TTYH3Q9C0H2 523 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 GBP3Q9H0R5 595 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ASCC2Q9H1I8 757 aaPredicted RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KCTD10Q9H3F6 313 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NDST4Q9H3R1 872 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 TMEM134Q9H6X4 195 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 VTA1Q9NP79 307 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 A1CFQ9NQ94 594 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 PDLIM7Q9NR12 457 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SAMSN1Q9NSI8 373 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NRBP2Q9NSY0 501 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 FBXO28Q9NVF7 368 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 DMAC2Q9NW81 257 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 COL20A1Q9P218 1284 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SLC9A2Q9UBY0 812 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 EXOC7Q9UPT5 735 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MTMR7Q9Y216 660 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 LUC7L2Q9Y383 392 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 Q9Y3F1 56 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 MAFBQ9Y5Q3 323 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms