RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 BANK1Q8NDB2 785 aa14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 RDM1Q8NG50 284 aa14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 RGL1Q9NZL6 768 aa14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
PDLIM2-212ENST00000443561 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 LAMA2P24043 3122 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 VPS37CA5D8V6 355 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 ZBTB39O15060 712 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 NBNO60934 754 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 IQCF3P0C7M6 154 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 SFNP31947 248 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 MGAT3Q09327 533 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 ZNF579Q8NAF0 562 aaKnown RBP14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 DYDC2Q96IM9 177 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 SH2D3AQ9BRG2 576 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 AZI2Q9H6S1 392 aa14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 TTC12Q9H892 705 aaPredicted RBP14.47□□□□□ -0.09
PDLIM2-212ENST00000443561 H3BQV1 296 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 HBP1O60381 514 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 C22orf31O95567 290 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 SPATA31C1P0DKV0 1188 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 ACRP10323 421 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 TXKP42681 527 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 IGBP1P78318 339 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 FPGSQ05932 587 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 PTGDRQ13258 359 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 ORC2Q13416 577 aaPredicted RBP14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 EPHA7Q15375 998 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 SHHQ15465 462 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 ECM1Q16610 540 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 TMEM240Q5SV17 173 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 RASIP1Q5U651 963 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 FAM160B1Q5W0V3 765 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 NCAPH2Q6IBW4 605 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 ANO5Q75V66 913 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 SLFN12Q8IYM2 578 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 HSD17B14Q9BPX1 270 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■■■■□ 19.3
PDLIM2-212ENST00000443561 TUBE1Q9UJT0 475 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 TRPC6Q9Y210 931 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 SAMM50Q9Y512 469 aa14.46□□□□□ -0.09
PDLIM2-212ENST00000443561 COL1A2P08123 1366 aa14.46□□□□□ -0.1
PDLIM2-212ENST00000443561 COL4A6Q14031 1691 aa14.46□□□□□ -0.1
PDLIM2-212ENST00000443561 TCHHQ07283 1943 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 SOX1O00570 391 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 SLITRK3O94933 977 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 OATP04181 439 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 SLC26A2P50443 739 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 GRIN1Q05586 938 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 CTTNQ14247 550 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 PLA2G4FQ68DD2 849 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 MTHFD1LQ6UB35 978 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 TRMT1LQ7Z2T5 733 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 CAGE1Q8TC20 777 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 EIF2AK1Q9BQI3 630 aaKnown RBP14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 LXNQ9BS40 222 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 PRKAG2Q9UGJ0 569 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 ZDHHC9Q9Y397 364 aa14.45□□□□□ -0.1
PDLIM2-212ENST00000443561 A0A087WWV3 80 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 PP2D1A8MPX8 630 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 STX6O43752 255 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 MED24O75448 989 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 CHRNA1P02708 482 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 CXCL10P02778 98 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 CTSHP09668 335 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 SELPP16109 830 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 KLRC1P26715 233 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 CYP4A11Q02928 519 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 DRP2Q13474 957 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 PTPAQ15257 358 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 RILPL1Q5EBL4 403 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 FAM26DQ5JW98 314 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 FAM109BQ6ICB4 259 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 IGSF22Q8N9C0 903 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 LRRC15Q8TF66 581 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 DNAJB3Q8WWF6 145 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 MMTAG2Q9BU76 263 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 UBE2OQ9C0C9 1292 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 IL23AQ9NPF7 189 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 CXXC1Q9P0U4 656 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 NOL7Q9UMY1 257 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 PCDHA12Q9UN75 941 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 NOD1Q9Y239 953 aa14.44□□□□□ -0.1
PDLIM2-212ENST00000443561 RRN3P2A6NIE6 340 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 TECP42680 631 aa14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDLIM2-212ENST00000443561 NPEPPSP55786 919 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms