RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 RUNDC3BQ96NL0 473 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 ABCB11O95342 1321 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 PSMC4P43686 418 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 SPP2Q13103 211 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 TRIM11Q96F44 468 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 WDR24Q96S15 920 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 MIS12Q9H081 205 aa24.28■■□□□ 1.48
CTDSPL-206ENST00000443503 CD58P19256 250 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 GBP1P32455 592 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 TROAPQ12815 778 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 ANKRD20A3Q5VUR7 823 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 CRAMP1Q96RY5 1269 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 PIM2Q9P1W9 311 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 KLRK1P26718 216 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 GEN1Q17RS7 908 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 SUGT1Q9Y2Z0 365 aa24.27■■□□□ 1.48
CTDSPL-206ENST00000443503 ZNF233A6NK53 670 aa24.27■■□□□ 1.47
CTDSPL-206ENST00000443503 XXYLT1Q8NBI6 393 aa24.27■■□□□ 1.47
CTDSPL-206ENST00000443503 USP11P51784 963 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 ATP11AP98196 1134 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 DPYDQ12882 1025 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 SPC25Q9HBM1 224 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 ITSN1Q15811 1721 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 I3L4J1 428 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 SRGAP2CP0DJJ0 459 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 CHRNA5P30532 468 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 NFU1Q9UMS0 254 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 ZHX2Q9Y6X8 837 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 CNTNAP5Q8WYK1 1306 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 IPO5O00410 1097 aaKnown RBP24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 CCNA1P78396 465 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 INTS5Q6P9B9 1019 aaKnown RBP24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 PPFIBP2Q8ND30 876 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 MCUR1Q96AQ8 359 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 ANKRD36BP1Q96IX9 119 aa24.26■■□□□ 1.47
CTDSPL-206ENST00000443503 A0A1B0GTH6 734 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 A0A1W2PQC6 194 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 PHBP35232 272 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 TRIM50Q86XT4 487 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 BBOF1Q8ND07 529 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 ARHGEF2Q92974 986 aaKnown RBP24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 MED10Q9BTT4 135 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 PXDNQ92626 1479 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 H7C0C1 242 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 ATP5OP48047 213 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 MRPS9P82933 396 aaKnown RBP24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 HDAC6Q9UBN7 1215 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 FEM1BQ9UK73 627 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 CAPN7Q9Y6W3 813 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 LIG3P49916 1009 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 CYP4F22Q6NT55 531 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 ADSSL1Q8N142 457 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 RIOK1Q9BRS2 568 aaKnown RBP24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 TMEM60Q9H2L4 133 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 BAIAP2L1Q9UHR4 511 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 NEURL4Q96JN8 1562 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 ANO9A1A5B4 782 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 WDR64B1ANS9 1081 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 POC1B-GALNT4F8VUJ3 575 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 ECEL1O95672 775 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 FGGP02679 453 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 CHP1Q99653 195 aa24.25■■□□□ 1.47
CTDSPL-206ENST00000443503 MARK3P27448 753 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 STK4Q13043 487 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 FAM81BQ96LP2 452 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 WRNIP1Q96S55 665 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 HSPA6P17066 643 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 NAALADL2Q58DX5 795 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 PRPF38AQ8NAV1 312 aaKnown RBP24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 RNF146Q9NTX7 359 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 SYNJ2BP-COX16A0A087WUM0 186 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 SLC16A4O15374 487 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 PDIA5Q14554 519 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 CCDC62Q6P9F0 684 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 MRPL47Q9HD33 250 aaKnown RBP24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 INTS9Q9NV88 658 aaKnown RBP24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 RGL1Q9NZL6 768 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 COX16Q9P0S2 106 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 KLHL14Q9P2G3 628 aa24.24■■□□□ 1.47
CTDSPL-206ENST00000443503 NEDD9Q14511 834 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 CC2D1AQ6P1N0 951 aaPredicted RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 DNAJC24Q6P3W2 148 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 LIMA1Q9UHB6 759 aaKnown RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 KDM6AO15550 1401 aaPredicted RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 MAN1A1P33908 653 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 FXR1P51114 621 aaKnown RBP eCLIP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 FAM149B1Q96BN6 582 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 PPP1R16BQ96T49 567 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 NACA2Q9H009 215 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 TBC1D22BQ9NU19 505 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 JCADQ9P266 1359 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 JAK3P52333 1124 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 SNRNP48Q6IEG0 339 aaKnown RBP24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 NLRP4Q96MN2 994 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 SGK1O00141 431 aa24.23■■□□□ 1.47
CTDSPL-206ENST00000443503 CCDC117Q8IWD4 279 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms