RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 PHF7Q9BWX1 381 aaPredicted RBP23.81■■□□□ 1.4
POLR2J3-202ENST00000443430 IGSF9BQ9UPX0 1349 aa23.81■■□□□ 1.4
POLR2J3-202ENST00000443430 PAK2Q13177 524 aa23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 MTMR1Q13613 665 aa23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 MYL10Q9BUA6 226 aa23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 TMX1Q9H3N1 280 aa23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 TLE6Q9H808 572 aa23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 SEC63Q9UGP8 760 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-202ENST00000443430 FNDC1Q4ZHG4 1894 aaPredicted RBP23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 M0QZ92 97 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 CTCFLQ8NI51 663 aaPredicted RBP23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 RPGRIP1Q96KN7 1286 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 CELF4Q9BZC1 486 aaKnown RBP23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 PSTPIP2Q9H939 334 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 JADE2Q9NQC1 790 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 PCDHA2Q9Y5H9 948 aa23.79■■□□□ 1.4
POLR2J3-202ENST00000443430 PER2O15055 1255 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 ST18O60284 1047 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 KIF5BP33176 963 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 RBM10P98175 930 aaKnown RBP23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 SIGLEC14Q08ET2 396 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 ZNF654Q8IZM8 581 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 ATP8B4Q8TF62 1192 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 TRAPPC12Q8WVT3 735 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 LRFN2Q9ULH4 789 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 KDM3AQ9Y4C1 1321 aa23.78■■□□□ 1.4
POLR2J3-202ENST00000443430 MAFGO15525 162 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 DDAH1O94760 285 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 ATF7P17544 494 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 UBE3AQ05086 875 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 PLCB4Q15147 1175 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 MB21D2Q8IYB1 491 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 SRBD1Q8N5C6 995 aaKnown RBP23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 VN1R2Q8NFZ6 395 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 MICAL1Q8TDZ2 1067 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 SUSD6Q92537 303 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 ASIC4Q96FT7 647 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 LZTS2Q9BRK4 669 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 LY9Q9HBG7 655 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 JPH1Q9HDC5 661 aaPredicted RBP23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 TRPC6Q9Y210 931 aa23.77■■□□□ 1.4
POLR2J3-202ENST00000443430 CFAP54Q96N23 3096 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 PLEKHA8P1O95397 391 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 GSPT1P15170 499 aaKnown RBP23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 SARSP49591 514 aaKnown RBP23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 UBE2SQ16763 222 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 TMEM266Q2M3C6 531 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 AZI2Q9H6S1 392 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 TLR9Q9NR96 1032 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 SLC9A2Q9UBY0 812 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 PCDHB12Q9Y5F1 795 aa23.76■■□□□ 1.39
POLR2J3-202ENST00000443430 ZFHX2Q9C0A1 2572 aaPredicted RBP23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 SMIM35A0A1B0GVV1 85 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 MGEA5O60502 916 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 IBSPP21815 317 aaPredicted RBP23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 VCPP55072 806 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 KRT76Q01546 638 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 DUSP6Q16828 381 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 PLPPR4Q7Z2D5 763 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 CMTR1Q8N1G2 835 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 NME8Q8N427 588 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 PCDHA6Q9UN73 950 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 PCDHB7Q9Y5E2 793 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 PCDHA8Q9Y5H6 950 aa23.75■■□□□ 1.39
POLR2J3-202ENST00000443430 SPDYE3A6NKU9 549 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 GNAQP50148 359 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 ERVFC1P60507 584 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 NFX1Q12986 1120 aaKnown RBP23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 SPOUT1Q5T280 376 aaKnown RBP23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 RUFY2Q8WXA3 655 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 CDCA3Q99618 268 aaPredicted RBP23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 ERVK-5Q9HDB9 667 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 KCNH7Q9NS40 1196 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 FAM86C1Q9NVL1 165 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 EVPLQ92817 2033 aa23.74■■□□□ 1.39
POLR2J3-202ENST00000443430 FGF18O76093 207 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 AVPR2P30518 371 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 STAT5BP51692 787 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 ACTR2P61160 394 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 FAM102BQ5T8I3 360 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 TTC22Q5TAA0 569 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 MTHFD1LQ6UB35 978 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 NEK1Q96PY6 1258 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 AAASQ9NRG9 546 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 HCSTQ9UBK5 93 aa23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 PTPRZ1P23471 2315 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-202ENST00000443430 MYO10Q9HD67 2058 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 hCG_1642624A0A1W2PR95 340 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 TBKBP1A7MCY6 615 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 FSCN2O14926 492 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 CHMLP26374 656 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 KCNC3Q14003 757 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 PTPN21Q16825 1174 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 TMEM184AQ6ZMB5 413 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 CYP2W1Q8TAV3 490 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 MXRA8Q9BRK3 442 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 S1PR5Q9H228 398 aa23.72■■□□□ 1.39
POLR2J3-202ENST00000443430 CDHR5Q9HBB8 845 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms