RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 MED19A0JLT2 244 aaPredicted RBP16.09■□□□□ 0.17
LINC00642-202ENST00000442515 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
LINC00642-202ENST00000442515 TMEM62Q0P6H9 643 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 IER5Q5VY09 327 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 PDE12Q6L8Q7 609 aaKnown RBP16.09■□□□□ 0.17
LINC00642-202ENST00000442515 PIGSQ96S52 555 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 POMKQ9H5K3 350 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 ERAP1Q9NZ08 941 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
LINC00642-202ENST00000442515 TBKBP1A7MCY6 615 aa16.08■□□□□ 0.16
LINC00642-202ENST00000442515 M0QZ92 97 aa16.08■□□□□ 0.16
LINC00642-202ENST00000442515 ASGR2P07307 311 aa16.08■□□□□ 0.16
LINC00642-202ENST00000442515 HOXB8P17481 243 aaPredicted RBP16.08■□□□□ 0.16
LINC00642-202ENST00000442515 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.16
LINC00642-202ENST00000442515 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
LINC00642-202ENST00000442515 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
LINC00642-202ENST00000442515 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
LINC00642-202ENST00000442515 CLCN5P51795 746 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 TRAF1Q13077 416 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 CWF19L1Q69YN2 538 aaKnown RBP16.07■□□□□ 0.16
LINC00642-202ENST00000442515 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 GLG1Q92896 1179 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 TCF25Q9BQ70 676 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 ENTPD7Q9NQZ7 604 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 NCOR2Q9Y618 2525 aa16.07■□□□□ 0.16
LINC00642-202ENST00000442515 PLXNA4Q9HCM2 1894 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 ATP9AO75110 1047 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 PDE1AP54750 535 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 FAM102BQ5T8I3 360 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 PCNX4Q63HM2 1172 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
LINC00642-202ENST00000442515 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 TYW1Q9NV66 732 aaKnown RBP16.06■□□□□ 0.16
LINC00642-202ENST00000442515 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
LINC00642-202ENST00000442515 CACNA1BQ00975 2339 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 MGEA5O60502 916 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 INSRRP14616 1297 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 KCNA2P16389 499 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
LINC00642-202ENST00000442515 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
LINC00642-202ENST00000442515 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 DGLUCYQ7Z3D6 616 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
LINC00642-202ENST00000442515 CASP10Q92851 521 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
LINC00642-202ENST00000442515 ADAM7Q9H2U9 754 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 SMARCAD1Q9H4L7 1026 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 ZNF292O60281 2723 aa16.05■□□□□ 0.16
LINC00642-202ENST00000442515 EP300Q09472 2414 aaPredicted RBP16.05■□□□□ 0.16
LINC00642-202ENST00000442515 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 CYTH3O43739 400 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 LAG3P18627 525 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 SEC23AQ15436 765 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 XRRA1Q6P2D8 792 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 CCDC105Q8IYK2 499 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
LINC00642-202ENST00000442515 FLCNQ8NFG4 579 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 KRT23Q9C075 422 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 CWH43Q9H720 699 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 NGRNQ9NPE2 291 aaKnown RBP16.04■□□□□ 0.16
LINC00642-202ENST00000442515 HCFC2Q9Y5Z7 792 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 EPG5Q9HCE0 2579 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 MYH6P13533 1939 aa16.04■□□□□ 0.16
LINC00642-202ENST00000442515 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 WEE2P0C1S8 567 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ARP10275 920 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 KRT76Q01546 638 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ITIH3Q06033 890 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 GRM4Q14833 912 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 TRAPPC12Q8WVT3 735 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 PCYT2Q99447 389 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ADAM2Q99965 735 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
LINC00642-202ENST00000442515 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
LINC00642-202ENST00000442515 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms