RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SHBGP04278 402 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 MMEP08473 750 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 CCNHP51946 323 aaPredicted RBP22.12■■□□□ 1.13
SHOX2-203ENST00000441443 NONOQ15233 471 aaKnown RBP eCLIP22.12■■□□□ 1.13
SHOX2-203ENST00000441443 USP17L1Q7RTZ2 530 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 MTFR1LQ9H019 292 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 GGT7Q9UJ14 662 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 FAM170AA1A519 330 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 NELFCDQ8IXH7 590 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 DAGLBQ8NCG7 672 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 NUDT12Q9BQG2 462 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 PVALEFA0A1B0GWK0 134 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 KCNK18Q7Z418 384 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 NEK8Q86SG6 692 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 ANKS4BQ8N8V4 417 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 MKNK2Q9HBH9 465 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 POTEMA6NI47 508 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 ANP32DO95626 131 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 ACTN1P12814 892 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 TBCKQ8TEA7 893 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 TBC1D22AQ8WUA7 517 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 ZNF317Q96PQ6 595 aaPredicted RBP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 ELAC2Q9BQ52 826 aaKnown RBP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 FGFBP2Q9BYJ0 223 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 GOPCQ9HD26 462 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 STX8Q9UNK0 236 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 DLEC1Q9Y238 1755 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 LDHBP07195 334 aaKnown RBP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 FKBP3Q00688 224 aaKnown RBP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 VPS72Q15906 364 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 SH3RF3Q8TEJ3 882 aaPredicted RBP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
SHOX2-203ENST00000441443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.11■■□□□ 1.13
SHOX2-203ENST00000441443 SMCO2A6NFE2 343 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 ZNF571Q7Z3V5 609 aaPredicted RBP22.1■■□□□ 1.13
SHOX2-203ENST00000441443 MAPKAPK5Q8IW41 473 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 LRRC34Q8IZ02 419 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 MYOCDQ8IZQ8 938 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 LRRC57Q8N9N7 239 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 TLCD1Q96CP7 247 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 PANK4Q9NVE7 773 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 BIN2Q9UBW5 565 aaPredicted RBP22.1■■□□□ 1.13
SHOX2-203ENST00000441443 COL22A1Q8NFW1 1626 aaPredicted RBP22.1■■□□□ 1.13
SHOX2-203ENST00000441443 GRM4Q14833 912 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 ADAT2Q7Z6V5 191 aaKnown RBP22.1■■□□□ 1.13
SHOX2-203ENST00000441443 TAX1BP1Q86VP1 789 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 HOOK2Q96ED9 719 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 CNOT10Q9H9A5 744 aaKnown RBP22.1■■□□□ 1.13
SHOX2-203ENST00000441443 MYH4Q9Y623 1939 aa22.1■■□□□ 1.13
SHOX2-203ENST00000441443 BHMG1C9JSJ3 638 aaPredicted RBP22.09■■□□□ 1.13
SHOX2-203ENST00000441443 PEX26Q7Z412 305 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 CALR3Q96L12 384 aaKnown RBP22.09■■□□□ 1.13
SHOX2-203ENST00000441443 SLC12A4Q9UP95 1085 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 NR2E1Q9Y466 385 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 CES2O00748 559 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 TM4SF1P30408 202 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 COPB2P35606 906 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 GALNT17Q6IS24 598 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 KRT25Q7Z3Z0 450 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 EBF2Q9HAK2 575 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 VAT1LQ9HCJ6 419 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 TMEM260Q9NX78 707 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 AIPL1Q9NZN9 384 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 AGAP1Q9UPQ3 857 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 UTP11Q9Y3A2 253 aaKnown RBP22.09■■□□□ 1.13
SHOX2-203ENST00000441443 WNK3Q9BYP7 1800 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 AGAP11Q8TF27 550 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 SPDL1Q96EA4 605 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 RIC8AQ9NPQ8 531 aa22.09■■□□□ 1.13
SHOX2-203ENST00000441443 EPS15P42566 896 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 IFNAR2P48551 515 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 SLC8A3P57103 927 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 CCDC26Q8TAB7 109 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 FMO2Q99518 471 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 ABCF3Q9NUQ8 709 aa22.08■■□□□ 1.13
SHOX2-203ENST00000441443 VIMP08670 466 aaKnown RBP22.08■■□□□ 1.12
SHOX2-203ENST00000441443 GCKP35557 465 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 PDE6BP35913 854 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 DAAM2Q86T65 1068 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 UHMK1Q8TAS1 419 aaKnown RBP22.08■■□□□ 1.12
SHOX2-203ENST00000441443 PRMT1Q99873 361 aaKnown RBP22.08■■□□□ 1.12
SHOX2-203ENST00000441443 ZMYND12Q9H0C1 365 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 ATP8A2Q9NTI2 1148 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 C15orf41Q9Y2V0 281 aa22.08■■□□□ 1.12
SHOX2-203ENST00000441443 ZBTB48P10074 688 aaPredicted RBP22.07■■□□□ 1.12
SHOX2-203ENST00000441443 KCNJ2P63252 427 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 ZCWPW2Q504Y3 356 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 MEX3CQ5U5Q3 659 aaKnown RBP22.07■■□□□ 1.12
SHOX2-203ENST00000441443 MAB21L3Q8N8X9 362 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 TPCN2Q8NHX9 752 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 CASZ1Q86V15 1759 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 CCDC188H7C350 402 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 PEX19P40855 299 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 IFI35P80217 286 aaPredicted RBP22.07■■□□□ 1.12
SHOX2-203ENST00000441443 SNX29Q8TEQ0 813 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 RAD54LQ92698 747 aa22.07■■□□□ 1.12
SHOX2-203ENST00000441443 STK17AQ9UEE5 414 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms