RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 TCEAL1Q15170 157 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 SESTD1Q86VW0 696 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 MAGEB6Q8N7X4 407 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 GANQ9H2C0 597 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 RXFP1Q9HBX9 757 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 ADAM22Q9P0K1 906 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 CPSF2Q9P2I0 782 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 SLC4A4Q9Y6R1 1079 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 NCANO14594 1321 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 DCDC2CA8MYV0 355 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 PRDM1O75626 825 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 ATP5HO75947 161 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 EYA4O95677 639 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 ATP4AP20648 1035 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 CABP4P57796 275 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 KLRC3Q07444 240 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 SLC30A9Q6PML9 568 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 SYCE1Q8N0S2 351 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 NUP133Q8WUM0 1156 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 THOC1Q96FV9 657 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 LRRC27Q9C0I9 530 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 NOC2LQ9Y3T9 749 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 USP15Q9Y4E8 981 aaPredicted RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 TNS1Q9HBL0 1735 aaKnown RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 BUB1O43683 1085 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 SSBP05455 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
LMO3-208ENST00000441439 FLT3P36888 993 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 UBA7P41226 1012 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 NLRP5P59047 1200 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 KRT71Q3SY84 523 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 FAM83BQ5T0W9 1011 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 LRRC34Q8IZ02 419 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 SPDYE1Q8NFV5 336 aaPredicted RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 OR2W6PQ8NHA6 318 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
LMO3-208ENST00000441439 TRAPPC9Q96Q05 1148 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
LMO3-208ENST00000441439 FAM205AQ6ZU69 1335 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 PLCG1P19174 1290 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 ATP6V1C1P21283 382 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 PDE6BP35913 854 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 MSH2P43246 934 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 PAPOLAP51003 745 aaKnown RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 CABP7Q86V35 215 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 DTNBP1Q96EV8 351 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 NAF1Q96HR8 494 aaKnown RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 CCDC28BQ9BUN5 200 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 ROBO3Q96MS0 1386 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 RBBP6Q7Z6E9 1792 aaKnown RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 NKRFO15226 690 aaKnown RBP eCLIP8.56□□□□□ -1.04
LMO3-208ENST00000441439 CAND2O75155 1236 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 FTCDO95954 541 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 HLTFQ14527 1009 aaKnown RBP eCLIP8.56□□□□□ -1.04
LMO3-208ENST00000441439 CNGA2Q16280 664 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 LDHAL6AQ6ZMR3 332 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 NBPF5PQ86XG9 351 aaPredicted RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 UBLCP1Q8WVY7 318 aaPredicted RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 RAB3IPQ96QF0 476 aaPredicted RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 NLRC4Q9NPP4 1024 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 FAM207AQ9NSI2 230 aaPredicted RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 PCDHA6Q9UN73 950 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 UTP11Q9Y3A2 253 aaKnown RBP8.56□□□□□ -1.04
LMO3-208ENST00000441439 DAAM1Q9Y4D1 1078 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
LMO3-208ENST00000441439 TRAFD1O14545 582 aaPredicted RBP8.55□□□□□ -1.04
LMO3-208ENST00000441439 IRF6O14896 467 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 DIAPH2O60879 1101 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 HADHBP55084 474 aaKnown RBP8.55□□□□□ -1.04
LMO3-208ENST00000441439 ODF2Q5BJF6 829 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 TRIM59Q8IWR1 403 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 NEK9Q8TD19 979 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 PARD3BQ8TEW8 1205 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 INPP5DQ92835 1189 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 GRAMD1AQ96CP6 724 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 TBC1D31Q96DN5 1066 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 PSMB7Q99436 277 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 FMO2Q99518 471 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
LMO3-208ENST00000441439 TMEM60Q9H2L4 133 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 ECT2Q9H8V3 914 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 PRKAB2O43741 272 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 TCEA3O75764 348 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 UBOX5O94941 541 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 ALAS1P13196 640 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 KCNJ2P63252 427 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
LMO3-208ENST00000441439 METTL13Q8N6R0 699 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 MMTAG2Q9BU76 263 aaKnown RBP8.55□□□□□ -1.04
LMO3-208ENST00000441439 LRMDAQ9H2I8 198 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 PARP2Q9UGN5 583 aa8.55□□□□□ -1.04
LMO3-208ENST00000441439 PNMA2Q9UL42 364 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms