RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 USP10Q14694 798 aaKnown RBP4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 SPDYAQ5MJ70 313 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF772Q68DY9 489 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 TCTN3Q6NUS6 607 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 LRRC37BQ96QE4 947 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 SLC39A2Q9NP94 309 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 TRAF6Q9Y4K3 522 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 PTPRKQ15262 1439 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 GLI2P10070 1586 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 TCRBV5S4A2TA0A5A2 114 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 FOXS1O43638 330 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF888P0CJ79 500 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 POLD1P28340 1107 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 DBPQ10586 325 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF568Q3ZCX4 644 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 HS1BP3Q53T59 392 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 BTBD8Q5XKL5 378 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 USP51Q70EK9 711 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZFPM1Q8IX07 1006 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 NLGN4XQ8N0W4 816 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 SH3RF2Q8TEC5 729 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF428Q96B54 188 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF669Q96BR6 464 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 NEIL1Q96FI4 390 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 SPATA9Q9BWV2 254 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 CARD11Q9BXL7 1154 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 TRIM55Q9BYV6 548 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 PTPN22Q9Y2R2 807 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 UHRF1BP1Q6BDS2 1440 aa4.61□□□□□ -1.67
HMGB1P18-201ENST00000438801 ESYT3A0FGR9 886 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 AQP7O14520 342 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 SUV39H1O43463 412 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 CUTAO60888 179 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 SLPIP03973 132 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 PTPN1P18031 435 aaKnown RBP4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 HMGA2P52926 109 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 PAK1Q13153 545 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 GPR19Q15760 415 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 DPP8Q6V1X1 898 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 SPATC1Q76KD6 591 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 MAMDC2Q7Z304 686 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 TAX1BP1Q86VP1 789 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 GIMAP8Q8ND71 665 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 RIC8BQ9NVN3 520 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 CCDC9Q9Y3X0 531 aaKnown RBP4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 PLB1Q6P1J6 1458 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 CHD4Q14839 1912 aa4.6□□□□□ -1.67
HMGB1P18-201ENST00000438801 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 FAM90A27PA6NNH2 459 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 RAC3P60763 192 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 TOP3AQ13472 1001 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 PRKD1Q15139 912 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 PDE4DIPQ5VU43 2346 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 ARHGAP36Q6ZRI8 547 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 MTDHQ86UE4 582 aaKnown RBP4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 SCUBE1Q8IWY4 988 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 PTPRN2Q92932 1015 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 FBXW5Q969U6 566 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 ADOQ96SZ5 270 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 CDC6Q99741 560 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 MRIQ9BWK5 157 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 ARHGAP28Q9P2N2 729 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 MSRB2Q9Y3D2 182 aa4.59□□□□□ -1.67
HMGB1P18-201ENST00000438801 KIAA1210Q9ULL0 1709 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 ALKQ9UM73 1620 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 MAP3K4Q9Y6R4 1608 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 CUX1P39880 1505 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 KIAA0586Q9BVV6 1533 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 AATKQ6ZMQ8 1374 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 WNT9AO14904 365 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 ADCY3O60266 1144 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 PYGMP11217 842 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 RRADP55042 308 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 RNF151Q2KHN1 245 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 PCDH19Q8TAB3 1148 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 CATSPERZQ9NTU4 200 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 PCDHA8Q9Y5H6 950 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 HS3ST3A1Q9Y663 406 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
HMGB1P18-201ENST00000438801 CAMTA1Q9Y6Y1 1673 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 TRBV23-1A0A0A0MS06 115 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 MAN2B1O00754 1011 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 U2SURPO15042 1029 aaKnown RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 PDPK1O15530 556 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 STK10O94804 968 aaKnown RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 AMY2AP04746 511 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 C6orf222P0C671 652 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 PDE6AP16499 860 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 AMY2BP19961 511 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 CR2P20023 1033 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 COMTP21964 271 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 GJA4P35212 333 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 ETV4P43268 484 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 GUCY1A3Q02108 690 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 RASGRF1Q13972 1273 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 WDR72Q3MJ13 1102 aa4.57□□□□□ -1.68
HMGB1P18-201ENST00000438801 MTERF2Q49AM1 385 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms