RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 B4GALT4O60513 344 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 FBXO21O94952 628 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 MPIG6BO95866 241 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 PTGS1P23219 599 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 AOAHP28039 575 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 SDHAP31040 664 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 MECP2P51608 486 aaKnown RBP4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 BMS1Q14692 1282 aaKnown RBP4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 TM4SF20Q53R12 229 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 DPP8Q6V1X1 898 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 PLEKHH3Q7Z736 793 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 GGNQ86UU5 652 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 REXO1L1PQ8IX06 675 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 WNK4Q96J92 1243 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 ZSWIM4Q9H7M6 989 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 TMEM260Q9NX78 707 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 GALNT8Q9NY28 637 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 ZDHHC9Q9Y397 364 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 B3GALT1Q9Y5Z6 326 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 H0Y858 1186 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 KCNK3O14649 394 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 RFPL3O75679 317 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 RAPGEF3O95398 923 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 ADRB1P08588 477 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 POLD1P28340 1107 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 CSF2RBP32927 897 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 MAGEA10P43363 369 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 TOP3AQ13472 1001 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 FSTL4Q6MZW2 842 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 SH3TC2Q8TF17 1288 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 MRFAP1L1Q96HT8 127 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 C1QTNF3Q9BXJ4 246 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 AMNQ9BXJ7 453 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 KCNH7Q9NS40 1196 aa4.93□□□□□ -1.62
HMGB3P12-201ENST00000438745 SLC12A8A0AV02 714 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 CUTAO60888 179 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 TMEM177Q53S58 311 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 CPZQ66K79 652 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 EP400NLQ6ZTU2 488 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 CISD2Q8N5K1 135 aaKnown RBP4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 IGSF22Q8N9C0 903 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 DNERQ8NFT8 737 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 BTBD2Q9BX70 525 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 PIF1Q9H611 641 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 SEC61A2Q9H9S3 476 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 INCENPQ9NQS7 918 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 ARHGAP28Q9P2N2 729 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 SLC4A7Q9Y6M7 1214 aa4.92□□□□□ -1.62
HMGB3P12-201ENST00000438745 B4E1Z4 1266 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 GOLGA6L22H0YM25 854 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 TRAF5O00463 557 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 SCDO00767 359 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 PPP1R12AO14974 1030 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 GPR42O15529 346 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 CNOT4O95628 575 aaKnown RBP4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ASLP04424 464 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 APPP05067 770 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ADAM17P78536 824 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 IL13RA1P78552 427 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ARHGAP44Q17R89 818 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 KANK2Q63ZY3 851 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 SLFN13Q68D06 897 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ZCCHC8Q6NZY4 707 aaKnown RBP4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ARHGEF18Q6ZSZ5 1173 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 LIMS2Q7Z4I7 341 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 SYNPOQ8N3V7 929 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ASB15Q8WXK1 588 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 RNPC3Q96LT9 517 aaKnown RBP4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 PTPN18Q99952 460 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ZDHHC5Q9C0B5 715 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 DISP3Q9P2K9 1392 aa4.91□□□□□ -1.62
HMGB3P12-201ENST00000438745 PDS5BQ9NTI5 1447 aa4.9□□□□□ -1.62
HMGB3P12-201ENST00000438745 PRAMEF25A6NGN4 478 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 DVL2O14641 736 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 MMEP08473 750 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 MC4RP32245 332 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 IGFALSP35858 605 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 ECE1P42892 770 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 EIF4HQ15056 248 aaKnown RBP4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF827Q17R98 1081 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 CATSPEREQ5SY80 951 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 CC2D1AQ6P1N0 951 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 GLB1LQ6UWU2 654 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 DBX2Q6ZNG2 339 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 C2orf69Q8N8R5 385 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 FOXRED1Q96CU9 486 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 GBP4Q96PP9 640 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 ORAI3Q9BRQ5 295 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 CARD11Q9BXL7 1154 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 CD248Q9HCU0 757 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 SMPD4Q9NXE4 827 aa4.9□□□□□ -1.63
HMGB3P12-201ENST00000438745 ZNF536O15090 1300 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms