RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CDH23Q9H251 3354 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 REV3LO60673 3130 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 EYSQ5T1H1 3165 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 DHX15O43143 795 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 TREHO43280 583 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 DEXIO95424 95 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 CKBP12277 381 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 FDPSP14324 419 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 PBX2P40425 430 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 SMAD3P84022 425 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 AKAP17AQ02040 695 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 SSRP1Q08945 709 aaKnown RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 ME3Q16798 604 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 SERINC5Q86VE9 423 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 LMBR1Q8WVP7 490 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 CDHR1Q96JP9 859 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 FAM161BQ96MY7 647 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 GUCD1Q96NT3 240 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 SETD4Q9NVD3 440 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 NFASCO94856 1347 aa9.73□□□□□ -0.85
HERPUD2-206ENST00000438224 DDX39AO00148 427 aaKnown RBP9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 CPLX1O14810 134 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 NBNO60934 754 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 LGR5O75473 907 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 FGBP02675 491 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 SELPP16109 830 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 MARK3P27448 753 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 CIITAP33076 1130 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 NEK4P51957 841 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 ACTR2P61160 394 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 PTK7Q13308 1070 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 BFSP2Q13515 415 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 NIPA1Q7RTP0 329 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 GIMAP8Q8ND71 665 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 CCDC148Q8NFR7 591 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 AFAP1L1Q8TED9 768 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 SLKQ9H2G2 1235 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 SH3GLB2Q9NR46 395 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 SLC9A2Q9UBY0 812 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 EMSYQ7Z589 1322 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 STK36Q9NRP7 1315 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 BRWD1Q9NSI6 2320 aa9.72□□□□□ -0.85
HERPUD2-206ENST00000438224 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
HERPUD2-206ENST00000438224 ARID2Q68CP9 1835 aa9.71□□□□□ -0.85
HERPUD2-206ENST00000438224 NLRC5Q86WI3 1866 aa9.71□□□□□ -0.85
HERPUD2-206ENST00000438224 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 MAFGO15525 162 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 JAK2O60674 1132 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 ATG7O95352 703 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 DNAJB2P25686 324 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 GNA11P29992 359 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 NLRP5P59047 1200 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 CCDC60Q8IWA6 550 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 DAGLBQ8NCG7 672 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 GTF3C6Q969F1 213 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 GJA10Q969M2 543 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 PHF20Q9BVI0 1012 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 PCDHA4Q9UN74 947 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 YBX2Q9Y2T7 364 aaKnown RBP9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 ATG2AQ2TAZ0 1938 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 TTC3P53804 2025 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 MYO7AQ13402 2215 aa9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.86
HERPUD2-206ENST00000438224 IGKV6D-21A0A0A0MT36 114 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 MBLAC1A4D2B0 266 aaPredicted RBP9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 TDP2O95551 362 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 CXCL10P02778 98 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 CTSHP09668 335 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 MYOGP15173 224 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 ZNF76P36508 570 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 RABGGTBP53611 331 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 GRIK4Q16099 956 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 PRR16Q569H4 304 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 EARS2Q5JPH6 523 aaKnown RBP9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 MARCH8Q5T0T0 291 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 C6orf132Q5T0Z8 1188 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 ABHD15Q6UXT9 468 aa9.7□□□□□ -0.86
HERPUD2-206ENST00000438224 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms