RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 JADE2Q9NQC1 790 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 PCDHA6Q9UN73 950 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 PCDHA8Q9Y5H6 950 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 M0R296 226 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PDE4AP27815 886 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 SPOUT1Q5T280 376 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 SLC9A2Q9UBY0 812 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 BARX2Q9UMQ3 279 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 MAFGO15525 162 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PRC1O43663 620 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 RXRAP19793 462 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 COASYQ13057 564 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PLCB4Q15147 1175 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 TMEM266Q2M3C6 531 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 SMRP1Q8NCR6 262 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 PRSS33Q8NF86 280 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 TLE6Q9H808 572 aa13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 USP15Q9Y4E8 981 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-207ENST00000435083 IGSF9BQ9UPX0 1349 aa13.27□□□□□ -0.28
CHRNA1-207ENST00000435083 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.28
CHRNA1-207ENST00000435083 ZNF318Q5VUA4 2279 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 TECTAO75443 2155 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 GLP2RO95838 553 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 ZXDAP98168 799 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 KRT76Q01546 638 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 IER5LQ5T953 404 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 RAB11FIP4Q86YS3 637 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 SUGP1Q8IWZ8 645 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 TMTC2Q8N394 836 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 TMX1Q9H3N1 280 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 GINS2Q9Y248 185 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 PCDHB12Q9Y5F1 795 aa13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 RBM8AQ9Y5S9 174 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-207ENST00000435083 PER2O15055 1255 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 SGSM2O43147 1006 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 SARSP49591 514 aaKnown RBP13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 STAT5BP51692 787 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 PTPN5P54829 565 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 ACTR2P61160 394 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 PLPPR4Q7Z2D5 763 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 NME8Q8N427 588 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 MAP4K1Q92918 833 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 PHF7Q9BWX1 381 aaPredicted RBP13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 KCNH7Q9NS40 1196 aa13.26□□□□□ -0.29
CHRNA1-207ENST00000435083 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 CALM1P0DP23 149 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 CALM2P0DP24 149 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 CALM3P0DP25 149 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 ARP10275 920 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 MCM5P33992 734 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 RBM10P98175 930 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 AAASQ9NRG9 546 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 KDM3AQ9Y4C1 1321 aa13.25□□□□□ -0.29
CHRNA1-207ENST00000435083 DENND3A2RUS2 1198 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 MGEA5O60502 916 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 RPS6KA5O75582 802 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 FGF18O76093 207 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 KLRC1P26715 233 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 UBE3AQ05086 875 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 PKN1Q16512 942 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 PRRX2Q99811 253 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 ADAM2Q99965 735 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 CDHR5Q9HBB8 845 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 TLR9Q9NR96 1032 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 NFASCO94856 1347 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 ERVFC1P60507 584 aa13.24□□□□□ -0.29
CHRNA1-207ENST00000435083 FAM102BQ5T8I3 360 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms