RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 PSME4Q14997 1843 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 ATRNL1Q5VV63 1379 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 COL11A2P13942 1736 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CYP3A7-CYP3A51PA0A087WV96 503 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CCDC151A5D8V7 595 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 FANCGO15287 622 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CCNT1O60563 726 aaKnown RBP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 ZRANB2O95218 330 aaKnown RBP eCLIP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 KIF20AO95235 890 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 GNRH1P01148 92 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 THBS1P07996 1170 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CYP3A7P24462 503 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CASP1P29466 404 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 SHMT1P34896 483 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 KRT9P35527 623 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 USP11P51784 963 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 GTF2IP78347 998 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 KRT83P78385 493 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 ZBED6P86452 979 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CALCRLQ16602 461 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 WHAMMP3Q1A5X7 153 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 LETM2Q2VYF4 491 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 ARHGAP29Q52LW3 1261 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 STRIP1Q5VSL9 837 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 STYK1Q6J9G0 422 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 SRGAP1Q7Z6B7 1085 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 SMYD4Q8IYR2 804 aaPredicted RBP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 RASSF8Q8NHQ8 419 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 LARP4BQ92615 738 aaKnown RBP8.27□□□□□ -1.09
COL17A1-204ENST00000433822 GOLGA1Q92805 767 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 CUL5Q93034 780 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 RPGRIP1Q96KN7 1286 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 KANSL2Q9H9L4 492 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 JAG2Q9Y219 1238 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 GDAQ9Y2T3 454 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
COL17A1-204ENST00000433822 ATAD5Q96QE3 1844 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 ANO9A1A5B4 782 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 EIF3CLB5ME19 914 aaKnown RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 PSMD14O00487 310 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 NDUFA10O95299 355 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 AKR1B1P15121 316 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 MMP14P50281 582 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 ERVK-24P63145 666 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 UBXN1Q04323 297 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 GRB10Q13322 594 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 GRIN2CQ14957 1233 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 BRD3Q15059 726 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 KRT79Q5XKE5 535 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 APOBEC3HQ6NTF7 200 aaKnown RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CDC42EP5Q6NZY7 148 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 TATDN1Q6P1N9 297 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 DPP8Q6V1X1 898 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 TXLNBQ8N3L3 684 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CERS5Q8N5B7 392 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CSGALNACT2Q8N6G5 542 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 GMCL1P1Q8NEA9 526 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 RUBCNQ92622 972 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 RAD54LQ92698 747 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 STAMQ92783 540 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 WDR24Q96S15 920 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 NUP88Q99567 741 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 EIF3CQ99613 913 aaKnown RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 TUBGCP2Q9BSJ2 902 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 TSGA10Q9BZW7 698 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 MRPL44Q9H9J2 332 aaKnown RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 JMJD4Q9H9V9 463 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 DDX4Q9NQI0 724 aaKnown RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 BLOC1S4Q9NUP1 217 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 TAB2Q9NYJ8 693 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 LRWD1Q9UFC0 647 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 SERPINA10Q9UK55 444 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 RAB21Q9UL25 225 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 EPN1Q9Y6I3 576 aaPredicted RBP8.26□□□□□ -1.09
COL17A1-204ENST00000433822 MYH7BA7E2Y1 1941 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 ATP8B3O60423 1300 aa8.26□□□□□ -1.09
COL17A1-204ENST00000433822 EDIL3O43854 480 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ENTPD3O75355 529 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 GNA14O95837 355 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 GOLGA8HP0CJ92 632 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ZSCAN20P17040 1043 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 AMPD1P23109 780 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 CCT6AP40227 531 aaKnown RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ARHGAP25P42331 645 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 PMS1P54277 932 aaKnown RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ASIC1P78348 528 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms