RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MAP3K21Q5TCX8 1036 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 ERCC4Q92889 916 aaPredicted RBP29.53■■■□□ 2.32
TMEM248-205ENST00000433271 BHMT2Q9H2M3 363 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 AZI2Q9H6S1 392 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 DBR1Q9UK59 544 aaKnown RBP29.53■■■□□ 2.32
TMEM248-205ENST00000433271 SYCE3A1L190 88 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 SEPT4O43236 478 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 PPFIA4O75335 1185 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 PRR29P0C7W0 189 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 YWHABP31946 246 aaKnown RBP29.53■■■□□ 2.32
TMEM248-205ENST00000433271 TLK2Q86UE8 772 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 WDR81Q562E7 1941 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 EMSYQ7Z589 1322 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 SSBP05455 408 aaKnown RBP eCLIP29.52■■■□□ 2.32
TMEM248-205ENST00000433271 DPYDQ12882 1025 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 PLPPR4Q7Z2D5 763 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 C7orf25Q9BPX7 421 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 ANKEF1Q9NU02 776 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 PCDHA5Q9Y5H7 936 aa29.52■■■□□ 2.32
TMEM248-205ENST00000433271 DUSP11O75319 330 aaKnown RBP29.51■■■□□ 2.31
TMEM248-205ENST00000433271 HOXD8P13378 290 aaPredicted RBP29.51■■■□□ 2.31
TMEM248-205ENST00000433271 CNGA1P29973 690 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 CUL4BQ13620 913 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 SPATA20Q8TB22 786 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 TRIM9Q9C026 710 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 AP5M1Q9H0R1 490 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 SMARCAD1Q9H4L7 1026 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 PTCH2Q9Y6C5 1203 aa29.51■■■□□ 2.31
TMEM248-205ENST00000433271 A6NJR5 290 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 STBD1O95210 358 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 SMC2O95347 1197 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 GRK4P32298 578 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 PRKCEQ02156 737 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 XKR3Q5GH77 459 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 OTUD6AQ7L8S5 288 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 GLG1Q92896 1179 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 LENG1Q96BZ8 264 aaPredicted RBP29.5■■■□□ 2.31
TMEM248-205ENST00000433271 BLZF1Q9H2G9 400 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 TUBE1Q9UJT0 475 aa29.5■■■□□ 2.31
TMEM248-205ENST00000433271 MYMKA6NI61 221 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 MMP3P08254 477 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 ATP4AP20648 1035 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 CASP1P29466 404 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 SLC26A2P50443 739 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 UTP14CQ5TAP6 766 aaKnown RBP29.49■■■□□ 2.31
TMEM248-205ENST00000433271 NT5DC1Q5TFE4 455 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 CNNM4Q6P4Q7 775 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 ANO5Q75V66 913 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 BMP2KQ9NSY1 1161 aaPredicted RBP29.49■■■□□ 2.31
TMEM248-205ENST00000433271 MYH9P35579 1960 aaKnown RBP29.49■■■□□ 2.31
TMEM248-205ENST00000433271 SARSP49591 514 aaKnown RBP29.49■■■□□ 2.31
TMEM248-205ENST00000433271 DGKDQ16760 1214 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 GPBP1Q86WP2 473 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 SMARCE1Q969G3 411 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 PTPN22Q9Y2R2 807 aa29.49■■■□□ 2.31
TMEM248-205ENST00000433271 ARHGEF35A5YM69 484 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 OATP04181 439 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 HSPA8P11142 646 aaKnown RBP29.48■■■□□ 2.31
TMEM248-205ENST00000433271 CYP11B2P19099 503 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 CCND3P30281 292 aaPredicted RBP29.48■■■□□ 2.31
TMEM248-205ENST00000433271 RARRES1P49788 294 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 ZNF445P59923 1031 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 GSDMAQ96QA5 445 aa29.48■■■□□ 2.31
TMEM248-205ENST00000433271 INHAP05111 366 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 LGALS2P05162 132 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 RARBP10826 455 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 CPT1AP50416 773 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 BRDTQ58F21 947 aaPredicted RBP29.47■■■□□ 2.31
TMEM248-205ENST00000433271 ARSHQ5FYA8 562 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 TRMT1LQ7Z2T5 733 aaKnown RBP29.47■■■□□ 2.31
TMEM248-205ENST00000433271 TRIM50Q86XT4 487 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 DDX12PQ92771 950 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 KCND2Q9NZV8 630 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 LOXHD1Q8IVV2 1947 aa29.47■■■□□ 2.31
TMEM248-205ENST00000433271 RINT1Q6NUQ1 792 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 SASS6Q6UVJ0 657 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 FAM167AQ96KS9 214 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 NRBP2Q9NSY0 501 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 ERAP1Q9NZ08 941 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 HTTP42858 3142 aa29.46■■■□□ 2.31
TMEM248-205ENST00000433271 GJA9P57773 515 aa29.45■■■□□ 2.31
TMEM248-205ENST00000433271 CCDC43Q96MW1 224 aaKnown RBP29.45■■■□□ 2.31
TMEM248-205ENST00000433271 C16orf70Q9BSU1 422 aa29.45■■■□□ 2.31
TMEM248-205ENST00000433271 NIFKQ9BYG3 293 aaKnown RBP29.45■■■□□ 2.31
TMEM248-205ENST00000433271 SEPT9Q9UHD8 586 aaPredicted RBP29.45■■■□□ 2.31
TMEM248-205ENST00000433271 TMEM150BA6NC51 233 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 RPN1P04843 607 aaKnown RBP29.45■■■□□ 2.3
TMEM248-205ENST00000433271 ASIC1P78348 528 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 XKR9Q5GH70 373 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 PLA2G4FQ68DD2 849 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 C1orf186Q6ZWK4 172 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 DYMQ7RTS9 669 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 DNAJC19Q96DA6 116 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 RUSC1Q9BVN2 902 aa29.45■■■□□ 2.3
TMEM248-205ENST00000433271 UPF3AQ9H1J1 476 aaKnown RBP29.45■■■□□ 2.3
TMEM248-205ENST00000433271 NKX3-2P78367 333 aa29.44■■■□□ 2.3
TMEM248-205ENST00000433271 FSCN1Q16658 493 aaKnown RBP29.44■■■□□ 2.3
TMEM248-205ENST00000433271 PADI6Q6TGC4 694 aa29.44■■■□□ 2.3
TMEM248-205ENST00000433271 ATP8B4Q8TF62 1192 aa29.44■■■□□ 2.3
TMEM248-205ENST00000433271 BBXQ8WY36 941 aaPredicted RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms