RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 CEBPZQ03701 1054 aaKnown RBP20.67■□□□□ 0.9
RFTN1-202ENST00000431547 GRIK4Q16099 956 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 XKR3Q5GH77 459 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 ZNF484Q5JVG2 852 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 C4orf19Q8IY42 314 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 LMBR1Q8WVP7 490 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 CTAGE1Q96RT6 745 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 LXNQ9BS40 222 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 POLR3CQ9BUI4 534 aaPredicted RBP20.67■□□□□ 0.9
RFTN1-202ENST00000431547 ZSWIM4Q9H7M6 989 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 PDLIM7Q9NR12 457 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 TMEM39AQ9NV64 488 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 TFIP11Q9UBB9 837 aaKnown RBP20.67■□□□□ 0.9
RFTN1-202ENST00000431547 ATP6V1DQ9Y5K8 247 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 KIAA0355O15063 1070 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 LYPLA2O95372 231 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 SPATA31C1P0DKV0 1188 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 ZNF200P98182 395 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-202ENST00000431547 CTTNQ14247 550 aaKnown RBP20.66■□□□□ 0.9
RFTN1-202ENST00000431547 MARCH8Q5T0T0 291 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 TPH2Q8IWU9 490 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 NIFKQ9BYG3 293 aaKnown RBP20.66■□□□□ 0.9
RFTN1-202ENST00000431547 TUFT1Q9NNX1 390 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 WRAP73Q9P2S5 460 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-202ENST00000431547 TBX21Q9UL17 535 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 CIZ1Q9ULV3 898 aaPredicted RBP20.66■□□□□ 0.9
RFTN1-202ENST00000431547 NOD1Q9Y239 953 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 COL1A2P08123 1366 aa20.66■□□□□ 0.9
RFTN1-202ENST00000431547 MBLAC1A4D2B0 266 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-202ENST00000431547 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 TREHO43280 583 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 YEATS4O95619 227 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 MUTP22033 750 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 RPA1P27694 616 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 CYP4A11Q02928 519 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 PTK7Q13308 1070 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 FOXD4L6Q3SYB3 417 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-202ENST00000431547 FOXD4L3Q6VB84 417 aaPredicted RBP20.65■□□□□ 0.9
RFTN1-202ENST00000431547 SH3RF1Q7Z6J0 888 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 SERINC5Q86VE9 423 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 CATSPER3Q86XQ3 398 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 LINC00301Q8NCQ3 95 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 AK8Q96MA6 479 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 CFAP45Q9UL16 551 aa20.65■□□□□ 0.9
RFTN1-202ENST00000431547 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
RFTN1-202ENST00000431547 TRIM43BA6NCK2 446 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 DDX11L8A8MPP1 907 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 MED24O75448 989 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.89
RFTN1-202ENST00000431547 IGBP1P78318 339 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 DNM1Q05193 864 aaKnown RBP20.64■□□□□ 0.89
RFTN1-202ENST00000431547 STK38Q15208 465 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 HAUS3Q68CZ6 603 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 ANO5Q75V66 913 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 TRMT1LQ7Z2T5 733 aaKnown RBP20.64■□□□□ 0.89
RFTN1-202ENST00000431547 TRIM43Q96BQ3 446 aaPredicted RBP20.64■□□□□ 0.89
RFTN1-202ENST00000431547 PRKAG2Q9UGJ0 569 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 TUBE1Q9UJT0 475 aa20.64■□□□□ 0.89
RFTN1-202ENST00000431547 FBXO2Q9UK22 296 aaPredicted RBP20.64■□□□□ 0.89
RFTN1-202ENST00000431547 CYP2C9P11712 490 aa20.63■□□□□ 0.89
RFTN1-202ENST00000431547 XRCC6P12956 609 aaKnown RBP eCLIP20.63■□□□□ 0.89
RFTN1-202ENST00000431547 MARCKSP29966 332 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-202ENST00000431547 YWHABP31946 246 aaKnown RBP20.63■□□□□ 0.89
RFTN1-202ENST00000431547 TARBP2Q15633 366 aaKnown RBP20.63■□□□□ 0.89
RFTN1-202ENST00000431547 KRT79Q5XKE5 535 aa20.63■□□□□ 0.89
RFTN1-202ENST00000431547 OTUD6AQ7L8S5 288 aa20.63■□□□□ 0.89
RFTN1-202ENST00000431547 TRAPPC12Q8WVT3 735 aa20.63■□□□□ 0.89
RFTN1-202ENST00000431547 PRDM5Q9NQX1 630 aaPredicted RBP20.63■□□□□ 0.89
RFTN1-202ENST00000431547 PP2D1A8MPX8 630 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 SPTLC2O15270 562 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 PPP6R2O75170 966 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 CDC25AP30304 524 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 CCT6AP40227 531 aaKnown RBP20.62■□□□□ 0.89
RFTN1-202ENST00000431547 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 MTHFD1LQ6UB35 978 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 MMTAG2Q9BU76 263 aaKnown RBP20.62■□□□□ 0.89
RFTN1-202ENST00000431547 NOC4LQ9BVI4 516 aaKnown RBP20.62■□□□□ 0.89
RFTN1-202ENST00000431547 HIPK3Q9H422 1215 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 ANKEF1Q9NU02 776 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 SEPT9Q9UHD8 586 aaPredicted RBP20.62■□□□□ 0.89
RFTN1-202ENST00000431547 PPME1Q9Y570 386 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 PCDHA2Q9Y5H9 948 aa20.62■□□□□ 0.89
RFTN1-202ENST00000431547 MAGEB2O15479 319 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 SLC26A4O43511 780 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 TIMP1P01033 207 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 KLRC1P26715 233 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 GRIN1Q05586 938 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 RBL2Q08999 1139 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 BFSP2Q13515 415 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 RPAINQ86UA6 219 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 CCDC155Q8N6L0 562 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 KRI1Q8N9T8 703 aaKnown RBP20.61■□□□□ 0.89
RFTN1-202ENST00000431547 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 DHX38Q92620 1227 aaKnown RBP20.61■□□□□ 0.89
RFTN1-202ENST00000431547 IPO9Q96P70 1041 aaKnown RBP20.61■□□□□ 0.89
RFTN1-202ENST00000431547 NACC1Q96RE7 527 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 CEP89Q96ST8 783 aa20.61■□□□□ 0.89
RFTN1-202ENST00000431547 RCOR1Q9UKL0 485 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms