RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 NUP153P49790 1475 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CFAP99D6REC4 459 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 SGSM2O43147 1006 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PYGLP06737 847 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CKBP12277 381 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GARSP41250 739 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MXRA7P84157 204 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ZNF568Q3ZCX4 644 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PRR5LQ6MZQ0 368 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ASAP3Q8TDY4 903 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 SEPT1Q8WYJ6 367 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 LZICQ8WZA0 190 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GMCL1Q96IK5 515 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MSTO1Q9BUK6 570 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GREM2Q9H772 168 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ERAP1Q9NZ08 941 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 BIN1O00499 593 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 HSPA8P11142 646 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PMLP29590 882 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 HARS2P49590 506 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 SOX10P56693 466 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 NOP14P78316 857 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 UBE3CQ15386 1083 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CAMK4Q16566 473 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PAN2Q504Q3 1202 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 TIGD5Q53EQ6 642 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GPR158Q5T848 1215 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 KCTD1Q719H9 257 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 KBTBD3Q8NAB2 608 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 RSAD2Q8WXG1 361 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 DHX38Q92620 1227 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 IQCDQ96DY2 449 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CDK5RAP1Q96SZ6 601 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 NLRC4Q9NPP4 1024 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GPN3Q9UHW5 284 aaPredicted RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 USTQ9Y2C2 406 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 VWA3AA6NCI4 1184 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MFAP3P55082 362 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PPATQ06203 517 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 XRRA1Q6P2D8 792 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 TOGARAM2Q6ZUX3 1019 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 PPP1R13BQ96KQ4 1090 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CCDC42Q96M95 316 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 HEXIM2Q96MH2 286 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 NT5C1BQ96P26 610 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 NLNQ9BYT8 704 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 FAM129AQ9BZQ8 928 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 VPS37BQ9H9H4 285 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ABI3Q9P2A4 366 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ADH1AP07327 375 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GSTA1P08263 222 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 GSTA2P09210 222 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 KRT15P19012 456 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CALRP27797 417 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 FPGSQ05932 587 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ASPHQ12797 758 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 SUSD4Q5VX71 490 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CHMP1BQ7LBR1 199 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CCDC170Q8IYT3 715 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ENOX1Q8TC92 643 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 C16orf45Q96MC5 204 aaPredicted RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 UBN2Q6ZU65 1347 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ERVK-7P63135 1459 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ABCA5Q8WWZ7 1642 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 KDM4FA0A1W2PPD8 638 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 GRXCR2A6NFK2 248 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 ATG13O75143 517 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 KRT3P12035 628 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 PHBP35232 272 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 MTA1Q13330 715 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 THOC5Q13769 683 aaKnown RBP4.87□□□□□ -1.63
LRRK2-204ENST00000430804 GIT2Q14161 759 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 MXD4Q14582 209 aaPredicted RBP4.87□□□□□ -1.63
LRRK2-204ENST00000430804 ASIC2Q16515 512 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 THEMIS2Q5TEJ8 643 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 ATL3Q6DD88 541 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 RNF217Q8TC41 542 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 LLPHQ9BRT6 129 aaKnown RBP4.87□□□□□ -1.63
LRRK2-204ENST00000430804 FTHL17Q9BXU8 183 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 GPR108Q9NPR9 543 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 MRPL17Q9NRX2 175 aaKnown RBP4.87□□□□□ -1.63
LRRK2-204ENST00000430804 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 GAKO14976 1311 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 CLDN3O15551 220 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 KLHL41O60662 606 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 GGPS1O95749 300 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 ERVK-10P10266 1014 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 CTSEP14091 401 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 ITGAXP20702 1163 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 STAT5BP51692 787 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 MNAT1P51948 309 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 AP3M2P53677 418 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 SLFN5Q08AF3 891 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 PPIL2Q13356 520 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 LRRC32Q14392 662 aa4.87□□□□□ -1.63
LRRK2-204ENST00000430804 STX1AQ16623 288 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms