RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 COL1A2P08123 1366 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 H0YGN5 161 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TREHO43280 583 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 DKC1O60832 514 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 CAND2O75155 1236 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 SLITRK3O94933 977 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TIMP1P01033 207 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 CYP2C9P11712 490 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ITGB8P26012 769 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ANP32AP39687 249 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ZNF200P98182 395 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TARBP2Q15633 366 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TRIM71Q2Q1W2 868 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ZNF484Q5JVG2 852 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TAF2Q6P1X5 1199 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 BANK1Q8NDB2 785 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 USP28Q96RU2 1077 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 LXNQ9BS40 222 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 RAB34Q9BZG1 259 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 HIPK3Q9H422 1215 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 PRDM5Q9NQX1 630 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 RGL1Q9NZL6 768 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 TUBE1Q9UJT0 475 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ZMYND8Q9ULU4 1186 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 NOD1Q9Y239 953 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 ZDHHC9Q9Y397 364 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 CLIC4Q9Y696 253 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
SMARCAL1-207ENST00000430374 RPLP2P05387 115 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 SPATA31C1P0DKV0 1188 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 SYN1P17600 705 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 MUTP22033 750 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 RPA1P27694 616 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 NASPP49321 788 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 CYP4A11Q02928 519 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 BFSP2Q13515 415 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 HAUS3Q68CZ6 603 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 MFSD5Q6N075 450 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 ANO5Q75V66 913 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 CATSPER3Q86XQ3 398 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 ERMNQ8TAM6 284 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 WNT8BQ93098 351 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 DYDC2Q96IM9 177 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 NRBP2Q9NSY0 501 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 PPME1Q9Y570 386 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 LAMA2P24043 3122 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-207ENST00000430374 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 MED24O75448 989 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 C22orf31O95567 290 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 CKBP12277 381 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 RAG1P15918 1043 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 KLRC1P26715 233 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 YWHABP31946 246 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 IGBP1P78318 339 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 CTTNQ14247 550 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 SLC39A14Q15043 492 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 PRPF38BQ5VTL8 546 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 MTHFD1LQ6UB35 978 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 RUFY4Q6ZNE9 571 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 TPH2Q8IWU9 490 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 CCDC155Q8N6L0 562 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 LINC00301Q8NCQ3 95 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 TRAPPC12Q8WVT3 735 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 AK8Q96MA6 479 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 ZNF396Q96N95 335 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 GDF15Q99988 308 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 MMTAG2Q9BU76 263 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 LRWD1Q9UFC0 647 aa10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-207ENST00000430374 UMODL1Q5DID0 1318 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 SMIM35A0A1B0GVV1 85 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 TMEM150BA6NC51 233 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 MAGEB2O15479 319 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 SLC26A4O43511 780 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 PARNO95453 639 aaKnown RBP10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 YEATS4O95619 227 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 IQCF3P0C7M6 154 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 SELPP16109 830 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 CYP2C18P33260 490 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 LONP1P36776 959 aaKnown RBP10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 NUCB2P80303 420 aa10.62□□□□□ -0.71
SMARCAL1-207ENST00000430374 FAM26DQ5JW98 314 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms