RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 STAT5BP51692 787 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 NPY5RQ15761 445 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 ABHD15Q6UXT9 468 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 CCDC60Q8IWA6 550 aaPredicted RBP19.22■□□□□ 0.67
UBE3D-204ENST00000430071 ARNTL2Q8WYA1 636 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 GJA10Q969M2 543 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 GJB4Q9NTQ9 266 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 KIAA1671Q9BY89 1806 aa19.22■□□□□ 0.67
UBE3D-204ENST00000430071 IGKV6D-21A0A0A0MT36 114 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 KIF28PB7ZC32 967 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 GHRP10912 638 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 ATP4AP20648 1035 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 GNA11P29992 359 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 CUL4AQ13619 759 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 PRR16Q569H4 304 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 MYOCDQ8IZQ8 938 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 CCDC12Q8WUD4 166 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 ZBED2Q9BTP6 218 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 COL25A1Q9BXS0 654 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 FAM49AQ9H0Q0 323 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 SH3GLB2Q9NR46 395 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 TRPC6Q9Y210 931 aa19.21■□□□□ 0.67
UBE3D-204ENST00000430071 SPTBN5Q9NRC6 3674 aaKnown RBP19.21■□□□□ 0.67
UBE3D-204ENST00000430071 IPO5O00410 1097 aaKnown RBP19.2■□□□□ 0.66
UBE3D-204ENST00000430071 CAND2O75155 1236 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 TMEM62Q0P6H9 643 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 MICALL1Q8N3F8 863 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 ZNF577Q9BSK1 485 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 AZI2Q9H6S1 392 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 CDY2AQ9Y6F7 541 aa19.2■□□□□ 0.66
UBE3D-204ENST00000430071 POTEB3A0JP26 581 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 LPXNO60711 386 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 CIITAP33076 1130 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 NLRP5P59047 1200 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 LPIN1Q14693 890 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 SWSAP1Q6NVH7 229 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 POTEBQ6S5H4 581 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 PLPPR4Q7Z2D5 763 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
UBE3D-204ENST00000430071 RPAINQ86UA6 219 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 CCDC148Q8NFR7 591 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 SEPT8Q92599 483 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 RAD9AQ99638 391 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 MTUS1Q9ULD2 1270 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 KCNJ14Q9UNX9 436 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 RALGAPA2Q2PPJ7 1873 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 M0R2N6 131 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 UPP2O95045 317 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 HMGN5P82970 282 aaKnown RBP19.19■□□□□ 0.66
UBE3D-204ENST00000430071 WASF1Q92558 559 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 IFIH1Q9BYX4 1025 aaKnown RBP19.19■□□□□ 0.66
UBE3D-204ENST00000430071 AGO3Q9H9G7 860 aaKnown RBP19.19■□□□□ 0.66
UBE3D-204ENST00000430071 MTCH2Q9Y6C9 303 aa19.19■□□□□ 0.66
UBE3D-204ENST00000430071 COL4A6Q14031 1691 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 RRN3P2A6NIE6 340 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 ZBTB42B2RXF5 422 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 BACH1O14867 736 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 MSH4O15457 936 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 FOSBP53539 338 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 GRB10Q13322 594 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 TAF2Q6P1X5 1199 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 TBCKQ8TEA7 893 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 GDPD5Q8WTR4 605 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 PHF20Q9BVI0 1012 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 PCDHA4Q9UN74 947 aa19.18■□□□□ 0.66
UBE3D-204ENST00000430071 FNDC1Q4ZHG4 1894 aaPredicted RBP19.17■□□□□ 0.66
UBE3D-204ENST00000430071 EFCAB14O75071 495 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 AMHP03971 560 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 MRPS6P82932 125 aaKnown RBP19.17■□□□□ 0.66
UBE3D-204ENST00000430071 FBXO47Q5MNV8 452 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 PDXDC2PQ6P474 469 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 MTHFD1LQ6UB35 978 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 BLIDQ8IZY5 108 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 LINC01599Q8WXQ3 324 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 C17orf80Q9BSJ5 609 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 CDHR5Q9HBB8 845 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 ZNF302Q9NR11 478 aa19.17■□□□□ 0.66
UBE3D-204ENST00000430071 TDP2O95551 362 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 KLRC1P26715 233 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 CD52P31358 61 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 HTRA4P83105 476 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-204ENST00000430071 MCTP2Q6DN12 878 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 RTN4RL1Q86UN2 441 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-204ENST00000430071 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-204ENST00000430071 TOP1MTQ969P6 601 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 SUGCTQ9HAC7 445 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-204ENST00000430071 PCDHA2Q9Y5H9 948 aa19.16■□□□□ 0.66
UBE3D-204ENST00000430071 XIRP2A4UGR9 3374 aa19.15■□□□□ 0.66
UBE3D-204ENST00000430071 HBP1O60381 514 aa19.15■□□□□ 0.66
UBE3D-204ENST00000430071 GJB2P29033 226 aa19.15■□□□□ 0.66
UBE3D-204ENST00000430071 ERVK-21P61565 698 aa19.15■□□□□ 0.66
UBE3D-204ENST00000430071 SETQ01105 290 aaPredicted RBP19.15■□□□□ 0.66
UBE3D-204ENST00000430071 UGCGQ16739 394 aa19.15■□□□□ 0.66
UBE3D-204ENST00000430071 ZNF746Q6NUN9 644 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms