RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RAD54LQ92698 747 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 NACC1Q96RE7 527 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 NUP62CLQ9H1M0 184 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 CUEDC2Q9H467 287 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 CLSTN2Q9H4D0 955 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 SMARCAD1Q9H4L7 1026 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 MAGEF1Q9HAY2 307 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 WRAP73Q9P2S5 460 aaPredicted RBP8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 USP25Q9UHP3 1055 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 SERTAD1Q9UHV2 236 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 HOOK1Q9UJC3 728 aaKnown RBP8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 DNM3Q9UQ16 869 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 TRPC6Q9Y210 931 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 Q9Y3F1 56 aa8.84□□□□□ -0.99
HMGA1P4-201ENST00000428643 TMEM150BA6NC51 233 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 MYADML2A6NDP7 307 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 A6NJR5 290 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 E9PMD0 336 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 ZNF862O60290 1169 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 ZEB2O60315 1214 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 PPFIA4O75335 1185 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 LGR5O75473 907 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 ATG7O95352 703 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 LYPLA2O95372 231 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 PLA2G4BP0C869 781 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 HOXD8P13378 290 aaPredicted RBP8.83□□□□□ -1
HMGA1P4-201ENST00000428643 MUTP22033 750 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 AFMP43652 599 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 PSMC6P62333 389 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 CAMK4Q16566 473 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 NAALADL2Q58DX5 795 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 XKR3Q5GH77 459 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 GNASQ5JWF2 1037 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 CCDC183Q5T5S1 534 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 GPBP1Q86WP2 473 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 C4orf19Q8IY42 314 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 GRAMD1CQ8IYS0 662 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 AFAP1L1Q8TED9 768 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 FAM167AQ96KS9 214 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 TIGD1Q96MW7 591 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 PCYT2Q99447 389 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 UNC93B1Q9H1C4 597 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 UPF3AQ9H1J1 476 aaKnown RBP8.83□□□□□ -1
HMGA1P4-201ENST00000428643 BHMT2Q9H2M3 363 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 TNMDQ9H2S6 317 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 ERAP1Q9NZ08 941 aa8.83□□□□□ -1
HMGA1P4-201ENST00000428643 MAFBQ9Y5Q3 323 aaPredicted RBP8.83□□□□□ -1
HMGA1P4-201ENST00000428643 IGKV6D-21A0A0A0MT36 114 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 ZBTB39O15060 712 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 USO1O60763 962 aaKnown RBP8.82□□□□□ -1
HMGA1P4-201ENST00000428643 ADAMTS4O75173 837 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 CAPN15O75808 1086 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 EYA4O95677 639 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
HMGA1P4-201ENST00000428643 CCL5P13501 91 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 SLC26A2P50443 739 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 GJA9P57773 515 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
HMGA1P4-201ENST00000428643 MCM6Q14566 821 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 POSTNQ15063 836 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 MTFR1Q15390 333 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 MTERF2Q49AM1 385 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 XKR9Q5GH70 373 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 KANK3Q6NY19 840 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 SV2BQ7L1I2 683 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 OTUD6AQ7L8S5 288 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 PLPPR4Q7Z2D5 763 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 RNF180Q86T96 592 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 ATP8B4Q8TF62 1192 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 LRRC15Q8TF66 581 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 STAMQ92783 540 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 PAGE5Q96GU1 130 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 CEP170P1Q96L14 293 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 DEFB118Q96PH6 123 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 SH2D3AQ9BRG2 576 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 C16orf70Q9BSU1 422 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 RNF208Q9H0X6 261 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
HMGA1P4-201ENST00000428643 BLOC1S4Q9NUP1 217 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 MCM3APO60318 1980 aa8.82□□□□□ -1
HMGA1P4-201ENST00000428643 H3BRB1 525 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 CTAGE5O15320 804 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 KPNA6O60684 536 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 TBCAO75347 108 aaKnown RBP8.81□□□□□ -1
HMGA1P4-201ENST00000428643 F2P00734 622 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 NPEPPSP55786 919 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 ASIC1P78348 528 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 AMPD3Q01432 767 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 RAD51AP2Q09MP3 1159 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 PPFIA1Q13136 1202 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 PNOCQ13519 176 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 MFSD10Q14728 455 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 PLCB4Q15147 1175 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 PADI6Q6TGC4 694 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 CXCL17Q6UXB2 119 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 ANO5Q75V66 913 aa8.81□□□□□ -1
HMGA1P4-201ENST00000428643 PCSK9Q8NBP7 692 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms