RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 ZBTB48P10074 688 aaPredicted RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 CTNNA1P35221 906 aaKnown RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 MNAT1P51948 309 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 SLC12A3P55017 1021 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 KCNA1Q09470 495 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 PLCB1Q9NQ66 1216 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 NOC2LQ9Y3T9 749 aaKnown RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 GCOM1H8Y6P7 765 aaPredicted RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 KRIT1O00522 736 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 AKAP3O75969 853 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 TTLL1O95922 423 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 MYZAPP0CAP1 466 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 GABPAQ06546 454 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 ZNF844Q08AG5 666 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 CATSPER3Q86XQ3 398 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 DHX36Q9H2U1 1008 aaKnown RBP17.2■□□□□ 0.34
GHDC-203ENST00000428494 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 RSPH10B2B2RC85 870 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 ZBTB5O15062 677 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 CLIC2O15247 247 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 RSPH10BP0C881 870 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 MCTP2Q6DN12 878 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 SFR1Q86XK3 245 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 UBLCP1Q8WVY7 318 aaPredicted RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 IGKV6D-41A0A0C4DH26 115 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 IL1R1P14778 569 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 SNAP25P60880 206 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 GIT2Q14161 759 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 PEX26Q7Z412 305 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 ACTRT1Q8TDG2 376 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
GHDC-203ENST00000428494 NR2E1Q9Y466 385 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 EP400Q96L91 3159 aa17.19■□□□□ 0.34
GHDC-203ENST00000428494 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 PGRMC1O00264 195 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 TTI1O43156 1089 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 GTF2IP78347 998 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 EDRF1Q3B7T1 1238 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 RC3H1Q5TC82 1133 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 PBKQ96KB5 322 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.344e-6■□□□□ 8
GHDC-203ENST00000428494 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 TRIM31Q9BZY9 425 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 KCNMB3Q9NPA1 279 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 CNOT8Q9UFF9 292 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 UBAP1LF5GYI3 381 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 FAM107AO95990 144 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 XRCC5P13010 732 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 KNOP1Q1ED39 458 aaKnown RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 ODF2Q5BJF6 829 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 DAAM2Q86T65 1068 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
GHDC-203ENST00000428494 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 GGA1Q9UJY5 639 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 GAKO14976 1311 aa17.18■□□□□ 0.34
GHDC-203ENST00000428494 FRMD3A2A2Y4 597 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 BTNL10A8MVZ5 291 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 TAL1P17542 331 aaPredicted RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 POLD1P28340 1107 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 COPB2P35606 906 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 CUL1Q13616 776 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 QPCTQ16769 361 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 PRR16Q569H4 304 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 ADAT2Q7Z6V5 191 aaKnown RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
GHDC-203ENST00000428494 OSGEPQ9NPF4 335 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 DDX3XO00571 662 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■□ 22.2
GHDC-203ENST00000428494 FSBPO95073 299 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 CYP4A11Q02928 519 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 EPHA7Q15375 998 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 SLC30A10Q6XR72 485 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 CYFIP2Q96F07 1278 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 SIX2Q9NPC8 291 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
GHDC-203ENST00000428494 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 PCDHA1Q9Y5I3 950 aa17.17■□□□□ 0.34
GHDC-203ENST00000428494 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
GHDC-203ENST00000428494 GFPT2O94808 682 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms