RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 NEFLP07196 543 aa30.95■■■□□ 2.55
LMO1-202ENST00000428101 CCDC60Q8IWA6 550 aaPredicted RBP30.95■■■□□ 2.55
LMO1-202ENST00000428101 ZNF577Q9BSK1 485 aa30.95■■■□□ 2.55
LMO1-202ENST00000428101 TM6SF1Q9BZW5 370 aa30.95■■■□□ 2.55
LMO1-202ENST00000428101 AGO3Q9H9G7 860 aaKnown RBP30.95■■■□□ 2.55
LMO1-202ENST00000428101 TTC3P53804 2025 aa30.95■■■□□ 2.54
LMO1-202ENST00000428101 MYH9P35579 1960 aaKnown RBP30.94■■■□□ 2.54
LMO1-202ENST00000428101 EDIL3O43854 480 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 CIITAP33076 1130 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 SETQ01105 290 aaPredicted RBP30.94■■■□□ 2.54
LMO1-202ENST00000428101 MTHFD1LQ6UB35 978 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 TSHZ1Q6ZSZ6 1077 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 CCDC148Q8NFR7 591 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 BICD2Q8TD16 824 aa30.94■■■□□ 2.54
LMO1-202ENST00000428101 LARP6Q9BRS8 491 aaKnown RBP30.94■■■□□ 2.54
LMO1-202ENST00000428101 COL4A6Q14031 1691 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 NCOR1O75376 2440 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 ENPP3O14638 875 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 BACH1O14867 736 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 IER5Q5VY09 327 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 FAM160B1Q5W0V3 765 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 FBXO22Q8NEZ5 403 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 ADAMTS19Q8TE59 1207 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 UPF3BQ9BZI7 483 aaKnown RBP30.93■■■□□ 2.54
LMO1-202ENST00000428101 BRWD1Q9NSI6 2320 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 EVPLQ92817 2033 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 NLRC5Q86WI3 1866 aa30.93■■■□□ 2.54
LMO1-202ENST00000428101 ATP4AP20648 1035 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 TMEM62Q0P6H9 643 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 PRR16Q569H4 304 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 SWSAP1Q6NVH7 229 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 MIS18BP1Q6P0N0 1132 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 ATP8B4Q8TF62 1192 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 LENG9Q96B70 501 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 ZNF274Q96GC6 653 aaPredicted RBP30.92■■■□□ 2.54
LMO1-202ENST00000428101 ZNF302Q9NR11 478 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 SH3GLB2Q9NR46 395 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 TBC1D22BQ9NU19 505 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 TRPV2Q9Y5S1 764 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 WDR81Q562E7 1941 aa30.92■■■□□ 2.54
LMO1-202ENST00000428101 SMIM35A0A1B0GVV1 85 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 HBP1O60381 514 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 BMP1P13497 986 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 EPC2Q52LR7 807 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 PDXDC2PQ6P474 469 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 COG5Q9UP83 839 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 SQORQ9Y6N5 450 aa30.91■■■□□ 2.54
LMO1-202ENST00000428101 KLRC1P26715 233 aa30.9■■■□□ 2.54
LMO1-202ENST00000428101 CD52P31358 61 aa30.9■■■□□ 2.54
LMO1-202ENST00000428101 KCNQ1P51787 676 aa30.9■■■□□ 2.54
LMO1-202ENST00000428101 ZNF746Q6NUN9 644 aaPredicted RBP30.9■■■□□ 2.54
LMO1-202ENST00000428101 ZBTB42B2RXF5 422 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 TNFRSF10AO00220 468 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 SSRP1Q08945 709 aaKnown RBP30.89■■■□□ 2.54
LMO1-202ENST00000428101 AAK1Q2M2I8 961 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 TRIM22Q8IYM9 498 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 NME8Q8N427 588 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 LINC01599Q8WXQ3 324 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 IL17RAQ96F46 866 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 SAMD11Q96NU1 681 aa30.89■■■□□ 2.54
LMO1-202ENST00000428101 CELF4Q9BZC1 486 aaKnown RBP30.89■■■□□ 2.54
LMO1-202ENST00000428101 MAFBQ9Y5Q3 323 aaPredicted RBP30.89■■■□□ 2.54
LMO1-202ENST00000428101 M0QZ92 97 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 NLRP5P59047 1200 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 RTN4RL1Q86UN2 441 aaPredicted RBP30.88■■■□□ 2.53
LMO1-202ENST00000428101 TMEM192Q8IY95 271 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 SMAP1Q8IYB5 467 aaPredicted RBP30.88■■■□□ 2.53
LMO1-202ENST00000428101 HLA-CQ95604 372 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 RC3H2Q9HBD1 1191 aaKnown RBP30.88■■■□□ 2.53
LMO1-202ENST00000428101 IGSF9BQ9UPX0 1349 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 KDM3AQ9Y4C1 1321 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 RALGAPA2Q2PPJ7 1873 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 COL1A2P08123 1366 aa30.88■■■□□ 2.53
LMO1-202ENST00000428101 KRT76Q01546 638 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 ZNF484Q5JVG2 852 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 IL27Q8NEV9 243 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 UHRF1Q96T88 793 aaPredicted RBP30.87■■■□□ 2.53
LMO1-202ENST00000428101 PDRG1Q9NUG6 133 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 PADI3Q9ULW8 664 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 PCDHA10Q9Y5I2 948 aa30.87■■■□□ 2.53
LMO1-202ENST00000428101 LINC00271P0C7V0 271 aa30.86■■■□□ 2.53
LMO1-202ENST00000428101 USP11P51784 963 aa30.86■■■□□ 2.53
LMO1-202ENST00000428101 STK3Q13188 491 aa30.86■■■□□ 2.53
LMO1-202ENST00000428101 KIAA0319LQ8IZA0 1049 aa30.86■■■□□ 2.53
LMO1-202ENST00000428101 PPP4R2Q9NY27 417 aa30.86■■■□□ 2.53
LMO1-202ENST00000428101 H3BNC9 293 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 CPLX1O14810 134 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 MSH4O15457 936 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 DEXIO95424 95 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 CRIPAKQ8N1N5 446 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 BBXQ8WY36 941 aaPredicted RBP30.85■■■□□ 2.53
LMO1-202ENST00000428101 ZNF689Q96CS4 500 aaPredicted RBP30.85■■■□□ 2.53
LMO1-202ENST00000428101 PCDHA4Q9UN74 947 aa30.85■■■□□ 2.53
LMO1-202ENST00000428101 M0R2N6 131 aa30.84■■■□□ 2.53
LMO1-202ENST00000428101 PSAPP07602 524 aa30.84■■■□□ 2.53
LMO1-202ENST00000428101 CKAP2LQ8IYA6 745 aa30.84■■■□□ 2.53
LMO1-202ENST00000428101 FIBCD1Q8N539 461 aa30.84■■■□□ 2.53
LMO1-202ENST00000428101 MRPL38Q96DV4 380 aaKnown RBP30.84■■■□□ 2.53
LMO1-202ENST00000428101 AIFM3Q96NN9 605 aa30.84■■■□□ 2.53
LMO1-202ENST00000428101 NECAB3Q96P71 396 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms