RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 GUCD1Q96NT3 240 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 SEMA6BQ9H3T3 888 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 SH2B1Q9NRF2 756 aaPredicted RBP16.81■□□□□ 0.28
RTN4-210ENST00000427710 DISC1Q9NRI5 854 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
RTN4-210ENST00000427710 PCDHA10Q9Y5I2 948 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 CDH23Q9H251 3354 aa16.81■□□□□ 0.28
RTN4-210ENST00000427710 MBLAC1A4D2B0 266 aaPredicted RBP16.8■□□□□ 0.28
RTN4-210ENST00000427710 RRN3P2A6NIE6 340 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 WDR64B1ANS9 1081 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 WNT7AO00755 349 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 CHRNA1P02708 482 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 ATP2A2P16615 1042 aaKnown RBP16.8■□□□□ 0.28
RTN4-210ENST00000427710 DEFB103AP81534 67 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 TMEM62Q0P6H9 643 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 TRIM29Q14134 588 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 MOXD1Q6UVY6 613 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 DBF4BQ8NFT6 615 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 RIT2Q99578 217 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 BRMS1Q9HCU9 246 aa16.8■□□□□ 0.28
RTN4-210ENST00000427710 MAFBQ9Y5Q3 323 aaPredicted RBP16.8■□□□□ 0.28
RTN4-210ENST00000427710 ZNF862O60290 1169 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 HBP1O60381 514 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 MGAT3Q09327 533 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 MTHFD1LQ6UB35 978 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 MIER3Q7Z3K6 550 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 SMAP1Q8IYB5 467 aaPredicted RBP16.79■□□□□ 0.28
RTN4-210ENST00000427710 C8orf76Q96K31 380 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
RTN4-210ENST00000427710 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 COL6A3P12111 3177 aa16.79■□□□□ 0.28
RTN4-210ENST00000427710 IGSF9BQ9UPX0 1349 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 ZBTB42B2RXF5 422 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 EML1O00423 815 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 ST18O60284 1047 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 PARNO95453 639 aaKnown RBP16.78■□□□□ 0.28
RTN4-210ENST00000427710 GHRP10912 638 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 KLRC1P26715 233 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 KCNJ6P48051 423 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
RTN4-210ENST00000427710 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 FAM117BQ6P1L5 589 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 TAF2Q6P1X5 1199 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.78■□□□□ 0.282e-12■□□□□ 10.7
RTN4-210ENST00000427710 MSRAQ9UJ68 235 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 PCDHA2Q9Y5H9 948 aa16.78■□□□□ 0.28
RTN4-210ENST00000427710 CHD9Q3L8U1 2897 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 CAND2O75155 1236 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 BAIAP3O94812 1187 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 SLC26A2P50443 739 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 JAK3P52333 1124 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 PRKCEQ02156 737 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 GRIN2CQ14957 1233 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 PLEKHG4Q58EX7 1191 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 B3GNT9Q6UX72 402 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 RSPH3Q86UC2 560 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 FAM184AQ8NB25 1140 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 MYLIPQ8WY64 445 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 HAS1Q92839 578 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 TMX3Q96JJ7 454 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 CDX2Q99626 313 aaPredicted RBP16.77■□□□□ 0.28
RTN4-210ENST00000427710 BACH2Q9BYV9 841 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 KCNMB3Q9NPA1 279 aa16.77■□□□□ 0.28
RTN4-210ENST00000427710 TTC3P53804 2025 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 TMEM150BA6NC51 233 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 MARCH6O60337 910 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 ARHGEF15O94989 841 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
RTN4-210ENST00000427710 MRPS6P82932 125 aaKnown RBP16.76■□□□□ 0.27
RTN4-210ENST00000427710 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
RTN4-210ENST00000427710 IKBKEQ14164 716 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 LPIN1Q14693 890 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 RAB30Q15771 203 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 RPAINQ86UA6 219 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 BANK1Q8NDB2 785 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
RTN4-210ENST00000427710 SEPT8Q92599 483 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 TNPO1Q92973 898 aaKnown RBP16.76■□□□□ 0.27
RTN4-210ENST00000427710 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 SH2D3AQ9BRG2 576 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 ZNF576Q9H609 170 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 CHD7Q9P2D1 2997 aa16.76■□□□□ 0.27
RTN4-210ENST00000427710 ARID2Q68CP9 1835 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 ABHD14A-ACY1A0A1B0GW23 586 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 OATP04181 439 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 SFNP31947 248 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.271e-8■□□□□ 8.6
RTN4-210ENST00000427710 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 TRPV2Q9Y5S1 764 aa16.75■□□□□ 0.27
RTN4-210ENST00000427710 COL1A2P08123 1366 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms