RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 IGFBP4P22692 258 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 KLRC1P26715 233 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 TAP1Q03518 808 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC01238-202ENST00000426962 ZNF484Q5JVG2 852 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 MOXD1Q6UVY6 613 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-202ENST00000426962 CKAP2LQ8IYA6 745 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 MYOCDQ8IZQ8 938 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 NECAB1Q8N987 351 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-202ENST00000426962 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 GTF3C6Q969F1 213 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 ZBTB10Q96DT7 871 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
LINC01238-202ENST00000426962 DISC1Q9NRI5 854 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 INSL6Q9Y581 213 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 CDY2AQ9Y6F7 541 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 CDH23Q9H251 3354 aa12.18□□□□□ -0.46
LINC01238-202ENST00000426962 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 WDR64B1ANS9 1081 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 M0QZ92 97 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 GAS7O60861 476 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 GHRP10912 638 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 FDPSP14324 419 aaKnown RBP12.17□□□□□ -0.46
LINC01238-202ENST00000426962 SFNP31947 248 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 MRPS6P82932 125 aaKnown RBP12.17□□□□□ -0.46
LINC01238-202ENST00000426962 LPIN1Q14693 890 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 FBXO47Q5MNV8 452 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 USP38Q8NB14 1042 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 MBOAT7Q96N66 472 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 CERS4Q9HA82 394 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 NRBP2Q9NSY0 501 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 GABBR1Q9UBS5 961 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 COL1A2P08123 1366 aa12.17□□□□□ -0.46
LINC01238-202ENST00000426962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 LCHNA4D1U4 455 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 ENPP3O14638 875 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 DTNBO60941 627 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 PSMD10O75832 226 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 LARGE1O95461 756 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 TDP2O95551 362 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 POU3F3P20264 500 aaPredicted RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 JAK3P52333 1124 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 HTRA4P83105 476 aaPredicted RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 INF2Q27J81 1249 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 TSHZ1Q6ZSZ6 1077 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 TRMT1LQ7Z2T5 733 aaKnown RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 RDM1Q8NG50 284 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
LINC01238-202ENST00000426962 CEP131Q9UPN4 1083 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 TRPV2Q9Y5S1 764 aa12.16□□□□□ -0.46
LINC01238-202ENST00000426962 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 ZBTB42B2RXF5 422 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 RFXAPO00287 272 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 MAGEB2O15479 319 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 UPP2O95045 317 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 TMEM62Q0P6H9 643 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 LETM2Q2VYF4 491 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 NEK8Q86SG6 692 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 NSUN7Q8NE18 718 aaKnown RBP12.15□□□□□ -0.46
LINC01238-202ENST00000426962 OXER1Q8TDS5 423 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 GJA10Q969M2 543 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 FAM167AQ96KS9 214 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 TGS1Q96RS0 853 aaKnown RBP12.15□□□□□ -0.46
LINC01238-202ENST00000426962 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
LINC01238-202ENST00000426962 UNC45AQ9H3U1 944 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 AGO3Q9H9G7 860 aaKnown RBP12.15□□□□□ -0.46
LINC01238-202ENST00000426962 BRMS1Q9HCU9 246 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 CHD9Q3L8U1 2897 aa12.15□□□□□ -0.46
LINC01238-202ENST00000426962 GBF1Q92538 1859 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 EPOPA6NHQ4 379 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 CHMP2AO43633 222 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
LINC01238-202ENST00000426962 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
LINC01238-202ENST00000426962 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
LINC01238-202ENST00000426962 CD52P31358 61 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 KRT2P35908 639 aa12.14□□□□□ -0.47
LINC01238-202ENST00000426962 ERVK-21P61565 698 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms