RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LY75O60449 1722 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 SORBS3O60504 671 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 UPP2O95045 317 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 TDP2O95551 362 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 NEFHP12036 1026 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 ERMNQ8TAM6 284 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 PYM1Q9BRP8 204 aaKnown RBP17.43■□□□□ 0.38
PKP4-205ENST00000426248 MAGEC2Q9UBF1 373 aaPredicted RBP17.43■□□□□ 0.38
PKP4-205ENST00000426248 IFFO1Q0D2I5 559 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 FAM133BQ5BKY9 247 aaKnown RBP17.42■□□□□ 0.38
PKP4-205ENST00000426248 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 AGPSO00116 658 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 KRT83P78385 493 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 CYP27A1Q02318 531 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 MYCBPAPQ8TBZ2 947 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 ENOX1Q8TC92 643 aaKnown RBP17.42■□□□□ 0.38
PKP4-205ENST00000426248 HDAC7Q8WUI4 952 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 ANO3Q9BYT9 981 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 EXOC1Q9NV70 894 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 MYO1AQ9UBC5 1043 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 NFU1Q9UMS0 254 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 C10orf71Q711Q0 1435 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 NDUFA10O95299 355 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 CYLC1P35663 651 aaPredicted RBP17.42■□□□□ 0.38
PKP4-205ENST00000426248 EPHB4P54760 987 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 ADCY2Q08462 1091 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 MSL3Q8N5Y2 521 aaKnown RBP17.42■□□□□ 0.38
PKP4-205ENST00000426248 ANKS1AQ92625 1134 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 GPRC5DQ9NZD1 345 aa17.42■□□□□ 0.38
PKP4-205ENST00000426248 MYO5AQ9Y4I1 1855 aaKnown RBP17.42■□□□□ 0.38
PKP4-205ENST00000426248 SMIM23A6NLE4 172 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 DIAPH2O60879 1101 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 PCK1P35558 622 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 GUCY2DQ02846 1103 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 TBX2Q13207 712 aaPredicted RBP17.41■□□□□ 0.38
PKP4-205ENST00000426248 GKAP1Q5VSY0 366 aaPredicted RBP17.41■□□□□ 0.38
PKP4-205ENST00000426248 DLK2Q6UY11 383 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 GPC2Q8N158 579 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 ZIM3Q96PE6 472 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 TAF1LQ8IZX4 1826 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 SHOX2O60902 331 aaPredicted RBP17.41■□□□□ 0.38
PKP4-205ENST00000426248 MXRA7P84157 204 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 TSC22D3Q99576 134 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 DMGDHQ9UI17 866 aaKnown RBP17.41■□□□□ 0.38
PKP4-205ENST00000426248 A0A1W2PRG0 241 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 USO1O60763 962 aaKnown RBP17.41■□□□□ 0.38
PKP4-205ENST00000426248 TACC1O75410 805 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 GJA10Q969M2 543 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
PKP4-205ENST00000426248 TESPA1A2RU30 521 aaPredicted RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 IREB2P48200 963 aaKnown RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 KCNV2Q8TDN2 545 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 SMCR8Q8TEV9 937 aaPredicted RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 RPAP3Q9H6T3 665 aaPredicted RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 FNTAP49354 379 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 FUT2Q10981 343 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ANKRD13CQ8N6S4 541 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ANKS4BQ8N8V4 417 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 SELENOSQ9BQE4 189 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ATP6V0A4Q9HBG4 840 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ABHD10Q9NUJ1 306 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 C4AP0C0L4 1744 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 PTGISQ16647 500 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 UBLCP1Q8WVY7 318 aaPredicted RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ELP3Q9H9T3 547 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 SLX4Q8IY92 1834 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ADM5C9JUS6 153 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 DGKZQ13574 1117 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 NR1I3Q14994 352 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 TTMPQ5BVD1 217 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
PKP4-205ENST00000426248 CCDC26Q8TAB7 109 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 ZMYND12Q9H0C1 365 aa17.4■□□□□ 0.38
PKP4-205ENST00000426248 MYZAPP0CAP1 466 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 ERVK-24P63145 666 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 SLC30A9Q6PML9 568 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 PPP1R12CQ9BZL4 782 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 EPB41L5Q9HCM4 733 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
PKP4-205ENST00000426248 POTEMA6NI47 508 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 SV2BQ7L1I2 683 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 FBXO2Q9UK22 296 aaPredicted RBP17.39■□□□□ 0.37
PKP4-205ENST00000426248 KLHL33A6NCF5 533 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
PKP4-205ENST00000426248 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 LDHDQ86WU2 507 aa17.39■□□□□ 0.37
PKP4-205ENST00000426248 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms